Experiment: D-Glucosamine Hydrochloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS01925 and ABZR86_RS01930 are separated by 79 nucleotides ABZR86_RS01930 and ABZR86_RS01935 are separated by 1 nucleotides ABZR86_RS01935 and ABZR86_RS01940 are separated by 131 nucleotides ABZR86_RS01940 and ABZR86_RS01945 are separated by 22 nucleotides
ABZR86_RS01925: ABZR86_RS01925 - 2-oxoglutarate and iron-dependent oxygenase domain-containing protein, at 418,650 to 419,597
_RS01925
ABZR86_RS01930: ABZR86_RS01930 - hypothetical protein, at 419,677 to 420,162
_RS01930
ABZR86_RS01935: ABZR86_RS01935 - SDR family oxidoreductase, at 420,164 to 420,976
_RS01935
ABZR86_RS01940: ABZR86_RS01940 - triose-phosphate isomerase, at 421,108 to 421,857
_RS01940
ABZR86_RS01945: ABZR86_RS01945 - preprotein translocase subunit SecG, at 421,880 to 422,335
_RS01945
Position (kb) 420
421 Strain fitness (log2 ratio) -1
0
1
2 at 419.386 kb on - strand, within ABZR86_RS01925 at 419.445 kb on + strand, within ABZR86_RS01925 at 419.457 kb on + strand, within ABZR86_RS01925 at 419.457 kb on + strand, within ABZR86_RS01925 at 419.458 kb on - strand, within ABZR86_RS01925 at 419.559 kb on + strand at 419.559 kb on + strand at 419.841 kb on + strand, within ABZR86_RS01930 at 419.900 kb on - strand, within ABZR86_RS01930 at 419.900 kb on - strand, within ABZR86_RS01930 at 419.923 kb on + strand, within ABZR86_RS01930 at 419.924 kb on - strand, within ABZR86_RS01930 at 419.924 kb on - strand, within ABZR86_RS01930 at 420.041 kb on + strand, within ABZR86_RS01930 at 420.042 kb on - strand, within ABZR86_RS01930 at 420.064 kb on + strand, within ABZR86_RS01930 at 420.065 kb on - strand, within ABZR86_RS01930 at 420.065 kb on - strand, within ABZR86_RS01930 at 420.139 kb on - strand at 420.144 kb on + strand at 420.144 kb on + strand at 420.144 kb on + strand at 420.145 kb on - strand at 420.145 kb on - strand at 420.145 kb on - strand at 420.145 kb on - strand at 420.412 kb on + strand, within ABZR86_RS01935 at 420.413 kb on - strand, within ABZR86_RS01935 at 420.492 kb on + strand, within ABZR86_RS01935 at 420.492 kb on + strand, within ABZR86_RS01935 at 420.492 kb on + strand, within ABZR86_RS01935 at 420.492 kb on + strand, within ABZR86_RS01935 at 420.492 kb on + strand, within ABZR86_RS01935 at 420.493 kb on - strand, within ABZR86_RS01935 at 420.493 kb on - strand, within ABZR86_RS01935 at 420.493 kb on - strand, within ABZR86_RS01935 at 420.493 kb on - strand, within ABZR86_RS01935 at 420.493 kb on - strand, within ABZR86_RS01935 at 420.511 kb on - strand, within ABZR86_RS01935 at 420.511 kb on - strand, within ABZR86_RS01935 at 420.517 kb on + strand, within ABZR86_RS01935 at 420.517 kb on + strand, within ABZR86_RS01935 at 420.517 kb on + strand, within ABZR86_RS01935 at 420.517 kb on + strand, within ABZR86_RS01935 at 420.517 kb on + strand, within ABZR86_RS01935 at 420.517 kb on + strand, within ABZR86_RS01935 at 420.517 kb on + strand, within ABZR86_RS01935 at 420.517 kb on + strand, within ABZR86_RS01935 at 420.517 kb on + strand, within ABZR86_RS01935 at 420.517 kb on + strand, within ABZR86_RS01935 at 420.517 kb on + strand, within ABZR86_RS01935 at 420.518 kb on - strand, within ABZR86_RS01935 at 420.518 kb on - strand, within ABZR86_RS01935 at 420.518 kb on - strand, within ABZR86_RS01935 at 420.518 kb on - strand, within ABZR86_RS01935 at 420.518 kb on - strand, within ABZR86_RS01935 at 420.518 kb on - strand, within ABZR86_RS01935 at 420.518 kb on - strand, within ABZR86_RS01935 at 420.518 kb on - strand, within ABZR86_RS01935 at 420.518 kb on - strand, within ABZR86_RS01935 at 420.518 kb on - strand, within ABZR86_RS01935 at 421.046 kb on + strand at 421.047 kb on - strand at 421.047 kb on - strand at 421.074 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (N) remove 419,386 - ABZR86_RS01925 0.78 +0.9 419,445 + ABZR86_RS01925 0.84 -0.2 419,457 + ABZR86_RS01925 0.85 -0.5 419,457 + ABZR86_RS01925 0.85 +0.4 419,458 - ABZR86_RS01925 0.85 +0.3 419,559 + +0.2 419,559 + +0.3 419,841 + ABZR86_RS01930 0.34 +1.1 419,900 - ABZR86_RS01930 0.46 +0.8 419,900 - ABZR86_RS01930 0.46 -0.1 419,923 + ABZR86_RS01930 0.51 -0.4 419,924 - ABZR86_RS01930 0.51 +0.3 419,924 - ABZR86_RS01930 0.51 +0.1 420,041 + ABZR86_RS01930 0.75 -0.2 420,042 - ABZR86_RS01930 0.75 +0.1 420,064 + ABZR86_RS01930 0.80 -0.2 420,065 - ABZR86_RS01930 0.80 +0.8 420,065 - ABZR86_RS01930 0.80 -0.4 420,139 - -0.6 420,144 + +0.8 420,144 + -0.8 420,144 + +0.4 420,145 - +0.7 420,145 - -0.2 420,145 - -1.3 420,145 - -0.1 420,412 + ABZR86_RS01935 0.31 -0.2 420,413 - ABZR86_RS01935 0.31 -0.1 420,492 + ABZR86_RS01935 0.40 +1.9 420,492 + ABZR86_RS01935 0.40 +0.0 420,492 + ABZR86_RS01935 0.40 +0.2 420,492 + ABZR86_RS01935 0.40 +0.3 420,492 + ABZR86_RS01935 0.40 -0.3 420,493 - ABZR86_RS01935 0.40 -0.6 420,493 - ABZR86_RS01935 0.40 -0.0 420,493 - ABZR86_RS01935 0.40 -0.3 420,493 - ABZR86_RS01935 0.40 +0.2 420,493 - ABZR86_RS01935 0.40 +0.6 420,511 - ABZR86_RS01935 0.43 +0.7 420,511 - ABZR86_RS01935 0.43 -0.1 420,517 + ABZR86_RS01935 0.43 -0.1 420,517 + ABZR86_RS01935 0.43 -0.1 420,517 + ABZR86_RS01935 0.43 -0.3 420,517 + ABZR86_RS01935 0.43 +0.2 420,517 + ABZR86_RS01935 0.43 +0.7 420,517 + ABZR86_RS01935 0.43 -0.1 420,517 + ABZR86_RS01935 0.43 -0.2 420,517 + ABZR86_RS01935 0.43 -0.5 420,517 + ABZR86_RS01935 0.43 +0.1 420,517 + ABZR86_RS01935 0.43 -0.9 420,517 + ABZR86_RS01935 0.43 +0.3 420,518 - ABZR86_RS01935 0.44 -0.2 420,518 - ABZR86_RS01935 0.44 +0.3 420,518 - ABZR86_RS01935 0.44 +0.1 420,518 - ABZR86_RS01935 0.44 -0.6 420,518 - ABZR86_RS01935 0.44 +0.1 420,518 - ABZR86_RS01935 0.44 -1.4 420,518 - ABZR86_RS01935 0.44 +0.0 420,518 - ABZR86_RS01935 0.44 -0.2 420,518 - ABZR86_RS01935 0.44 -0.2 420,518 - ABZR86_RS01935 0.44 -0.6 421,046 + -0.0 421,047 - +0.5 421,047 - +0.2 421,074 - -0.0
Or see this region's nucleotide sequence