Experiment: D-Glucosamine Hydrochloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS00930 and ABZR86_RS00935 are separated by 103 nucleotides ABZR86_RS00935 and ABZR86_RS00940 overlap by 14 nucleotides ABZR86_RS00940 and ABZR86_RS00945 overlap by 11 nucleotides
ABZR86_RS00930: ABZR86_RS00930 - Obg family GTPase CgtA, at 183,184 to 184,254
_RS00930
ABZR86_RS00935: ABZR86_RS00935 - DUF3375 domain-containing protein, at 184,358 to 185,827
_RS00935
ABZR86_RS00940: ABZR86_RS00940 - DUF4194 domain-containing protein, at 185,814 to 186,485
_RS00940
ABZR86_RS00945: ABZR86_RS00945 - SbcC/MukB-like Walker B domain-containing protein, at 186,475 to 189,870
_RS00945
Position (kb) 184
185
186 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 184.216 kb on - strand at 184.216 kb on - strand at 184.277 kb on + strand at 184.277 kb on + strand at 184.278 kb on - strand at 184.278 kb on - strand at 184.278 kb on - strand at 184.323 kb on + strand at 184.324 kb on - strand at 184.411 kb on - strand at 184.586 kb on + strand, within ABZR86_RS00935 at 184.586 kb on + strand, within ABZR86_RS00935 at 184.587 kb on - strand, within ABZR86_RS00935 at 184.587 kb on - strand, within ABZR86_RS00935 at 184.587 kb on - strand, within ABZR86_RS00935 at 184.587 kb on - strand, within ABZR86_RS00935 at 184.655 kb on + strand, within ABZR86_RS00935 at 184.656 kb on - strand, within ABZR86_RS00935 at 184.656 kb on - strand, within ABZR86_RS00935 at 184.685 kb on - strand, within ABZR86_RS00935 at 184.818 kb on - strand, within ABZR86_RS00935 at 185.035 kb on - strand, within ABZR86_RS00935 at 185.035 kb on - strand, within ABZR86_RS00935 at 185.315 kb on + strand, within ABZR86_RS00935 at 185.315 kb on + strand, within ABZR86_RS00935 at 185.316 kb on - strand, within ABZR86_RS00935 at 185.411 kb on + strand, within ABZR86_RS00935 at 185.412 kb on - strand, within ABZR86_RS00935 at 185.413 kb on + strand, within ABZR86_RS00935 at 185.413 kb on + strand, within ABZR86_RS00935 at 185.414 kb on - strand, within ABZR86_RS00935 at 186.132 kb on - strand, within ABZR86_RS00940 at 186.143 kb on + strand, within ABZR86_RS00940 at 186.143 kb on + strand, within ABZR86_RS00940 at 186.143 kb on + strand, within ABZR86_RS00940 at 186.144 kb on - strand, within ABZR86_RS00940 at 186.144 kb on - strand, within ABZR86_RS00940 at 186.144 kb on - strand, within ABZR86_RS00940 at 186.172 kb on - strand, within ABZR86_RS00940 at 186.223 kb on + strand, within ABZR86_RS00940 at 186.223 kb on + strand, within ABZR86_RS00940 at 186.223 kb on + strand, within ABZR86_RS00940 at 186.258 kb on + strand, within ABZR86_RS00940 at 186.259 kb on - strand, within ABZR86_RS00940 at 186.436 kb on + strand at 186.436 kb on + strand at 186.436 kb on + strand at 186.437 kb on - strand at 186.437 kb on - strand at 186.437 kb on - strand at 186.437 kb on - strand at 186.438 kb on + strand at 186.438 kb on + strand at 186.439 kb on - strand at 186.484 kb on - strand at 186.484 kb on - strand at 186.484 kb on - strand at 186.484 kb on - strand at 186.484 kb on - strand at 186.781 kb on + strand at 186.781 kb on + strand at 186.781 kb on + strand at 186.781 kb on + strand at 186.781 kb on + strand at 186.782 kb on - strand at 186.782 kb on - strand at 186.782 kb on - strand at 186.782 kb on - strand at 186.782 kb on - strand at 186.782 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (N) remove 184,216 - -0.7 184,216 - +0.1 184,277 + +0.7 184,277 + -1.0 184,278 - -0.0 184,278 - -0.3 184,278 - +0.4 184,323 + +0.1 184,324 - -0.6 184,411 - +0.7 184,586 + ABZR86_RS00935 0.16 +0.7 184,586 + ABZR86_RS00935 0.16 -0.8 184,587 - ABZR86_RS00935 0.16 +1.4 184,587 - ABZR86_RS00935 0.16 +0.1 184,587 - ABZR86_RS00935 0.16 -0.3 184,587 - ABZR86_RS00935 0.16 +0.1 184,655 + ABZR86_RS00935 0.20 -0.9 184,656 - ABZR86_RS00935 0.20 -0.6 184,656 - ABZR86_RS00935 0.20 -0.9 184,685 - ABZR86_RS00935 0.22 +0.6 184,818 - ABZR86_RS00935 0.31 -0.3 185,035 - ABZR86_RS00935 0.46 -0.7 185,035 - ABZR86_RS00935 0.46 -0.2 185,315 + ABZR86_RS00935 0.65 -0.1 185,315 + ABZR86_RS00935 0.65 -0.8 185,316 - ABZR86_RS00935 0.65 -0.3 185,411 + ABZR86_RS00935 0.72 +0.6 185,412 - ABZR86_RS00935 0.72 +0.1 185,413 + ABZR86_RS00935 0.72 -0.7 185,413 + ABZR86_RS00935 0.72 -0.4 185,414 - ABZR86_RS00935 0.72 +0.6 186,132 - ABZR86_RS00940 0.47 +0.1 186,143 + ABZR86_RS00940 0.49 +0.3 186,143 + ABZR86_RS00940 0.49 -0.4 186,143 + ABZR86_RS00940 0.49 +0.2 186,144 - ABZR86_RS00940 0.49 +0.3 186,144 - ABZR86_RS00940 0.49 -0.2 186,144 - ABZR86_RS00940 0.49 -0.7 186,172 - ABZR86_RS00940 0.53 -0.2 186,223 + ABZR86_RS00940 0.61 -0.1 186,223 + ABZR86_RS00940 0.61 -0.7 186,223 + ABZR86_RS00940 0.61 +0.3 186,258 + ABZR86_RS00940 0.66 +0.4 186,259 - ABZR86_RS00940 0.66 -3.1 186,436 + -0.7 186,436 + -1.1 186,436 + +0.3 186,437 - -0.9 186,437 - -0.7 186,437 - -0.6 186,437 - +0.2 186,438 + -0.3 186,438 + -0.6 186,439 - -0.8 186,484 - +0.3 186,484 - +0.3 186,484 - -0.4 186,484 - +1.8 186,484 - +0.4 186,781 + +0.1 186,781 + +0.4 186,781 + +0.0 186,781 + -0.2 186,781 + +0.4 186,782 - +0.2 186,782 - +0.1 186,782 - +0.1 186,782 - -2.2 186,782 - -0.6 186,782 - +0.3
Or see this region's nucleotide sequence