Strain Fitness in Shewanella loihica PV-4 around Shew_3636

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,335,803	+		Shew_3635	0.62	-0.4
4,335,803	+		Shew_3635	0.62	+0.4
4,335,806	-		Shew_3635	0.62	-0.1
4,335,806	-		Shew_3635	0.62	+0.2
4,335,845	+		Shew_3635	0.64	+0.6
4,335,959	+		Shew_3635	0.70	-0.0
4,336,077	+		Shew_3635	0.77	+0.4
4,336,093	-		Shew_3635	0.78	-0.8
4,336,181	+		Shew_3635	0.83	+0.2
4,336,189	-		Shew_3635	0.83	+0.9
4,336,240	-		Shew_3635	0.86	+0.5
4,336,243	+		Shew_3635	0.86	-0.3
4,336,341	-				+0.3
4,336,584	+				+0.6
4,336,584	+				+2.8
4,336,584	+				+0.2
4,336,584	+				+0.1
4,336,584	+				-0.9
4,336,584	+				+0.2
4,336,584	+				+0.4
4,336,592	-				+0.3
4,336,702	-				+0.4
4,336,836	+		Shew_3636	0.22	+1.3
4,336,920	-		Shew_3636	0.40	+0.3
4,337,141	-		Shew_3636	0.86	+0.3
4,337,191	-				+1.4
4,337,367	-				+0.5
4,337,513	-				-0.3
4,337,579	+				-0.1
4,337,630	+				-0.3
4,337,664	+				+0.6
4,337,709	+	ompR	Shew_3637	0.13	+0.0
4,337,803	+	ompR	Shew_3637	0.26	-0.1
4,337,819	+	ompR	Shew_3637	0.28	+0.2
4,337,863	-	ompR	Shew_3637	0.34	-0.4
4,337,928	+	ompR	Shew_3637	0.43	+1.1
4,338,050	+	ompR	Shew_3637	0.60	-0.7
4,338,152	-	ompR	Shew_3637	0.74	+0.2