Strain Fitness in Shewanella loihica PV-4 around Shew_3442

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,109,097	+		Shew_3440	0.73	-0.6
4,109,954	+				+0.0
4,110,018	+				-0.6
4,110,023	+				+0.6
4,110,023	+				+0.0
4,110,024	+				-0.3
4,110,024	+				-0.6
4,110,024	+				+0.2
4,110,029	+				+0.5
4,110,029	+				-1.7
4,110,031	-				-0.1
4,110,031	-				+0.1
4,110,037	-				-0.6
4,110,054	-		Shew_3442	0.11	+0.7
4,110,547	+		Shew_3442	0.78	+2.0
4,110,777	-		Shew_3443	0.14	+0.7
4,110,842	+		Shew_3443	0.43	-0.2
4,110,984	-				+0.1
4,111,289	-		Shew_3444	0.82	-0.2
4,111,390	+				+1.0
4,111,398	-				-0.1
4,111,400	-				+0.3
4,111,519	+				+0.1