Strain Fitness in Shewanella loihica PV-4 around Shew_3244

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,880,181	+		Shew_3243	0.68	-0.5
3,880,188	+		Shew_3243	0.68	+0.1
3,880,283	+		Shew_3243	0.71	+0.0
3,880,303	-		Shew_3243	0.72	+0.4
3,880,303	-		Shew_3243	0.72	-0.0
3,880,303	-		Shew_3243	0.72	+0.3
3,880,308	-		Shew_3243	0.72	-0.3
3,880,458	-		Shew_3243	0.77	+0.2
3,880,509	+		Shew_3243	0.78	-0.4
3,880,603	+		Shew_3243	0.81	+0.2
3,880,603	+		Shew_3243	0.81	+0.6
3,880,611	-		Shew_3243	0.82	+0.7
3,880,611	-		Shew_3243	0.82	-0.2
3,880,725	-		Shew_3243	0.85	-0.1
3,880,775	-		Shew_3243	0.87	+0.0
3,880,940	-				-0.1
3,881,119	+				+0.3
3,881,253	+		Shew_3244	0.11	-0.1
3,881,514	+		Shew_3244	0.47	+0.1
3,881,514	+		Shew_3244	0.47	+0.0
3,881,667	-		Shew_3244	0.68	-1.5
3,881,736	-		Shew_3244	0.78	-0.9
3,881,827	+				-0.5
3,881,959	+				-0.7
3,882,017	+		Shew_3245	0.13	+0.7
3,882,054	+		Shew_3245	0.17	-0.6
3,882,334	-		Shew_3245	0.48	-0.2
3,882,545	-		Shew_3245	0.72	+0.3
3,882,563	-		Shew_3245	0.74	+0.1
3,882,705	+		Shew_3245	0.90	+2.1
3,882,713	-				-0.5
3,882,713	-				-2.3
3,882,749	+				+1.2
3,882,749	+				+0.5
3,882,757	+				-0.8
3,882,757	-				+0.2
3,882,757	-				+0.4
3,882,757	-				+0.5
3,882,764	+				-0.2
3,882,765	-				+0.4
3,882,767	+				+0.4
3,882,767	+				+0.3
3,882,767	+				+0.2
3,882,772	-				-0.0
3,882,775	-				+0.7
3,882,775	-				-0.6
3,882,775	-				-0.2
3,882,775	-				+0.1
3,882,775	-				+0.3
3,882,777	-				+0.4
3,882,779	+				+0.0
3,882,779	+				+0.8
3,882,785	-				-0.1
3,882,824	-				-0.0
3,882,831	-				-0.0
3,882,834	-				-0.0
3,882,878	+				+0.1
3,882,878	+				-0.2
3,882,878	+				+0.1
3,882,878	+				+0.7
3,882,878	+				-0.0
3,882,878	+				-0.1
3,882,878	+				-0.9
3,882,878	+				-1.5
3,882,886	-				-0.1
3,882,886	-				-0.2
3,882,886	-				+0.9
3,882,886	-				+0.1
3,882,886	-				-0.2
3,882,886	-				+0.0
3,882,886	-				+0.7
3,882,886	-				-0.1
3,882,886	-				-0.2
3,882,886	-				-0.1
3,882,888	+				-2.1