Strain Fitness in Shewanella loihica PV-4 around Shew_2998

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,557,927	-				-0.2
3,557,966	-				-0.3
3,558,026	+		Shew_2997	0.13	+0.2
3,558,034	-		Shew_2997	0.14	-0.0
3,558,042	-		Shew_2997	0.15	+0.2
3,558,184	+		Shew_2997	0.37	-0.2
3,558,184	+		Shew_2997	0.37	+1.1
3,558,192	-		Shew_2997	0.38	+0.1
3,558,192	-		Shew_2997	0.38	-0.4
3,558,220	+		Shew_2997	0.42	+0.4
3,558,332	+		Shew_2997	0.60	+0.2
3,558,340	-		Shew_2997	0.61	-0.2
3,558,391	+		Shew_2997	0.68	-0.0
3,558,415	-		Shew_2997	0.72	+0.2
3,558,760	+				+0.4
3,558,805	-		Shew_2998	0.14	+0.3
3,559,100	-		Shew_2998	0.50	-0.5
3,559,139	-		Shew_2998	0.55	-0.4
3,559,160	-		Shew_2998	0.58	+0.0
3,559,579	+		Shew_2999	0.12	+0.0
3,559,679	+		Shew_2999	0.50	-0.6
3,559,742	+		Shew_2999	0.73	-1.1
3,559,789	-				-2.1
3,559,791	+				-0.5
3,559,794	-				-0.4
3,559,799	-				+0.1
3,559,834	-				-0.0
3,559,869	+				-0.3
3,559,879	+				+0.2
3,559,879	+				+0.3
3,559,879	+				-0.4
3,559,879	+				-0.0
3,559,919	-				-0.3
3,559,919	-				+0.2
3,559,938	-				+0.3
3,559,956	+				+0.5
3,560,031	+		Shew_3000	0.11	+0.1
3,560,031	+		Shew_3000	0.11	+0.3
3,560,259	-		Shew_3000	0.24	+0.7
3,560,297	+		Shew_3000	0.26	+0.0
3,560,305	-		Shew_3000	0.27	-0.2