Strain Fitness in Shewanella loihica PV-4 around Shew_2994

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,553,430	+				+0.2
3,553,430	+				+0.6
3,553,430	+				-0.1
3,553,438	-				+0.3
3,553,438	-				+0.2
3,553,438	-				+0.1
3,553,839	-		Shew_2993	0.57	-0.0
3,553,859	+		Shew_2993	0.60	-0.9
3,553,859	-		Shew_2993	0.60	-0.6
3,553,941	-		Shew_2993	0.72	+0.2
3,554,037	-		Shew_2993	0.87	+0.5
3,554,063	+				+0.1
3,554,078	-				-0.1
3,554,687	+		Shew_2994	0.83	-0.6
3,554,687	+		Shew_2994	0.83	-0.1
3,554,695	-		Shew_2994	0.86	-1.8
3,554,750	-				+0.5
3,554,750	-				+0.1
3,554,750	-				+0.1
3,554,779	+				+0.8
3,554,903	-		Shew_2995	0.12	-1.5
3,555,040	+		Shew_2995	0.23	-0.0
3,555,048	-		Shew_2995	0.24	+0.1
3,555,131	+		Shew_2995	0.31	-0.1
3,555,221	+		Shew_2995	0.38	+0.1
3,555,221	+		Shew_2995	0.38	+1.4
3,555,290	-		Shew_2995	0.43	+0.4
3,555,496	+		Shew_2995	0.60	+0.2