Strain Fitness in Shewanella loihica PV-4 around Shew_2910
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
3,447,935 | + | Shew_2908 | 0.71 | +0.4 | |
3,447,943 | - | Shew_2908 | 0.72 | -0.1 | |
3,447,970 | - | Shew_2908 | 0.75 | -0.1 | |
3,448,007 | + | Shew_2908 | 0.79 | -0.2 | |
3,448,015 | - | Shew_2908 | 0.80 | -0.1 | |
3,448,015 | - | Shew_2908 | 0.80 | +1.2 | |
3,448,104 | - | Shew_2908 | 0.89 | -0.1 | |
3,448,287 | - | -0.4 | |||
3,448,648 | - | +0.2 | |||
3,448,888 | - | Shew_2910 | 0.49 | +0.6 | |
3,449,038 | + | +0.8 | |||
3,449,038 | + | -2.4 | |||
3,449,038 | + | +0.1 | |||
3,449,046 | - | -0.6 | |||
3,449,046 | - | +0.0 | |||
3,449,064 | + | -1.9 |
Or see this region's nucleotide sequence