Strain Fitness in Shewanella loihica PV-4 around Shew_2884

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,422,578	-		Shew_2882	0.61	-0.5
3,422,724	+		Shew_2882	0.89	+0.2
3,422,751	-				+0.1
3,422,756	-				+0.2
3,423,035	+				+0.1
3,423,043	-				+0.3
3,423,043	-				+0.2
3,423,217	+		Shew_2883	0.60	+0.5
3,423,469	-				+0.1
3,423,497	+				-0.1
3,423,666	+		Shew_2884	0.40	-0.4
3,423,675	+		Shew_2884	0.42	-0.6
3,423,918	+				+0.1
3,424,063	-				+0.3
3,424,073	-				+0.1
3,424,073	-				-0.0
3,424,160	-				+0.1
3,424,247	+		Shew_2885	0.23	+0.0
3,424,247	+		Shew_2885	0.23	+0.9
3,424,258	+		Shew_2885	0.25	+0.1
3,424,271	-		Shew_2885	0.27	+0.1
3,424,317	-		Shew_2885	0.34	-0.0
3,424,457	-		Shew_2885	0.56	-0.4
3,424,457	-		Shew_2885	0.56	-0.2
3,424,493	-		Shew_2885	0.61	+0.1
3,424,519	+		Shew_2885	0.65	+0.0
3,424,650	+		Shew_2885	0.85	-0.1
3,424,796	-				-0.2
3,424,858	-				-1.7