Strain Fitness in Shewanella loihica PV-4 around Shew_2838

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,362,277	+		Shew_2837	0.37	+0.5
3,362,613	-				+0.6
3,362,700	-				-1.6
3,362,870	-				+1.1
3,362,871	-				+1.0
3,362,871	-				+0.9
3,363,040	+				+1.1
3,363,290	-	carB	Shew_2838	0.13	+1.2
3,363,496	-	carB	Shew_2838	0.19	+1.0
3,363,627	-	carB	Shew_2838	0.23	+0.9
3,363,704	-	carB	Shew_2838	0.26	+1.1
3,364,405	-	carB	Shew_2838	0.48	+0.4
3,364,436	+	carB	Shew_2838	0.49	+1.4
3,364,444	-	carB	Shew_2838	0.49	+0.7
3,365,736	-	carB	Shew_2838	0.89	+1.0
3,365,806	-				+1.2
3,365,811	-				+1.1
3,365,811	-				+0.9
3,365,892	+				+1.0
3,365,892	+				+1.1
3,365,950	-				+1.0
3,366,239	+		Shew_2839	0.11	+1.0
3,366,247	-		Shew_2839	0.11	+1.2
3,366,291	-		Shew_2839	0.15	+1.0
3,366,292	-		Shew_2839	0.15	+1.1