Strain Fitness in Shewanella loihica PV-4 around Shew_2665

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,139,610	-		Shew_2664	0.29	+1.4
3,139,659	+		Shew_2664	0.35	+0.5
3,139,683	+		Shew_2664	0.37	+0.6
3,139,709	+		Shew_2664	0.40	+0.6
3,139,920	-		Shew_2664	0.65	+2.8
3,139,942	-		Shew_2664	0.68	+0.4
3,140,157	+				+0.8
3,140,544	-				+1.3
3,141,009	+		Shew_2665	0.10	+1.7
3,141,262	+		Shew_2665	0.13	+0.8
3,141,272	+		Shew_2665	0.13	+1.0
3,141,432	-		Shew_2665	0.15	+1.0
3,141,982	+		Shew_2665	0.22	+0.8
3,141,990	-		Shew_2665	0.23	+1.0
3,141,991	-		Shew_2665	0.23	+1.2
3,142,033	-		Shew_2665	0.23	+0.9
3,142,141	-		Shew_2665	0.24	+1.2
3,142,158	+		Shew_2665	0.25	-0.1
3,142,188	-		Shew_2665	0.25	+1.2
3,142,721	-		Shew_2665	0.32	+1.0
3,142,814	+		Shew_2665	0.33	+0.4
3,142,954	-		Shew_2665	0.35	-0.1
3,142,954	-		Shew_2665	0.35	+1.1
3,143,165	-		Shew_2665	0.38	+1.2
3,143,285	+		Shew_2665	0.39	+1.0
3,143,461	-		Shew_2665	0.41	+0.8
3,143,803	+		Shew_2665	0.46	+1.0
3,143,859	-		Shew_2665	0.46	+1.0
3,143,886	-		Shew_2665	0.47	+0.8
3,144,202	+		Shew_2665	0.51	+0.7
3,144,684	+		Shew_2665	0.57	+1.0
3,144,747	-		Shew_2665	0.58	+0.7
3,145,052	-		Shew_2665	0.62	+1.3
3,145,344	+		Shew_2665	0.65	+0.4
3,145,477	+		Shew_2665	0.67	+0.9
3,145,728	+		Shew_2665	0.70	+1.1
3,145,790	+		Shew_2665	0.71	+0.6
3,145,807	+		Shew_2665	0.71	+0.3
3,145,849	-		Shew_2665	0.72	+0.8
3,146,444	+		Shew_2665	0.79	+0.7
3,146,469	-		Shew_2665	0.80	+1.2
3,146,647	+		Shew_2665	0.82	+1.3
3,147,361	+				+0.9
3,147,361	+				+2.3
3,147,369	-				+0.8
3,147,409	+				+1.5
3,147,409	+				+1.0
3,147,417	-				+0.7
3,147,427	+				+2.1
3,147,435	-				+0.1
3,147,693	-				+1.4
3,147,735	+				+0.8
3,147,735	+				+0.9
3,147,743	-				+0.8
3,148,261	+				+0.9
3,148,435	-		Shew_2666	0.17	+0.8
3,148,435	-		Shew_2666	0.17	+0.9
3,148,440	-		Shew_2666	0.17	+0.8
3,148,464	-		Shew_2666	0.18	+0.9
3,149,004	-		Shew_2666	0.43	+0.5