Strain Fitness in Shewanella loihica PV-4 around Shew_2572
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
3,030,413 | + | Shew_2571 | 0.43 | +1.0 | |
3,030,616 | - | Shew_2571 | 0.56 | +0.8 | |
3,031,040 | - | Shew_2571 | 0.82 | +0.4 | |
3,031,249 | - | +0.7 | |||
3,031,425 | - | +0.8 | |||
3,031,542 | + | Shew_2572 | 0.20 | +2.2 | |
3,031,857 | + | Shew_2572 | 0.60 | +2.3 | |
3,032,292 | + | +0.4 | |||
3,032,310 | - | +0.2 | |||
3,032,310 | - | +0.3 | |||
3,032,676 | - | Shew_2573 | 0.22 | +1.4 | |
3,032,825 | + | Shew_2573 | 0.29 | +1.2 |
Or see this region's nucleotide sequence