Strain Fitness in Shewanella loihica PV-4 around Shew_1705

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,958,299	+		Shew_1703	0.66	+0.1
1,958,299	+		Shew_1703	0.66	-0.1
1,958,305	+		Shew_1703	0.67	+0.6
1,958,305	+		Shew_1703	0.67	+0.5
1,958,307	-		Shew_1703	0.68	+0.2
1,958,313	-		Shew_1703	0.69	+1.3
1,958,313	-		Shew_1703	0.69	-0.3
1,958,313	-		Shew_1703	0.69	-1.0
1,958,313	-		Shew_1703	0.69	+1.4
1,958,351	+		Shew_1703	0.76	-0.6
1,958,351	+		Shew_1703	0.76	-0.0
1,958,359	-		Shew_1703	0.77	+0.6
1,958,385	-		Shew_1703	0.82	+2.6
1,958,385	-		Shew_1703	0.82	+0.4
1,958,389	+		Shew_1703	0.83	+0.1
1,958,397	-		Shew_1703	0.85	-0.2
1,958,458	-				-0.3
1,958,497	+				+0.1
1,958,497	+				-0.0
1,958,497	+				+1.3
1,958,497	+				+0.4
1,958,546	+				-0.7
1,958,546	+				-0.0
1,958,546	+				+1.3
1,958,546	+				-0.4
1,958,554	-				+0.4
1,958,554	-				+0.2
1,958,554	-				-0.0
1,958,581	-				-0.2
1,958,581	-				-0.2
1,958,622	+				+0.3
1,958,622	+				+0.0
1,958,622	+				+0.1
1,958,622	+				+0.1
1,958,622	+				-0.3
1,958,624	+				+0.0
1,958,637	-				+0.6
1,958,649	-				+0.4
1,958,824	+				+0.0
1,958,824	+				+0.1
1,958,858	+				-0.2
1,958,901	+		Shew_1704	0.17	+0.3
1,958,901	+		Shew_1704	0.17	+0.2
1,958,906	+		Shew_1704	0.18	+0.0
1,958,906	+		Shew_1704	0.18	-0.3
1,958,914	-		Shew_1704	0.20	-0.9
1,958,914	-		Shew_1704	0.20	+1.3
1,958,914	-		Shew_1704	0.20	+0.1
1,959,082	-		Shew_1704	0.56	-0.8
1,959,097	-		Shew_1704	0.59	+0.1
1,959,147	+		Shew_1704	0.70	-0.1
1,959,148	-		Shew_1704	0.70	+0.3
1,959,463	+		Shew_1705	0.45	+1.2
1,959,560	+		Shew_1705	0.72	+1.0
1,960,036	+		Shew_1706	0.71	+0.0
1,960,183	+				+0.1
1,960,517	+				+0.1