Strain Fitness in Shewanella loihica PV-4 around Shew_1386

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,593,695	+		Shew_1384	0.52	-0.1
1,593,905	+				+0.6
1,593,930	+				-1.0
1,594,241	-		Shew_1385	0.47	+0.3
1,594,277	+		Shew_1385	0.52	+0.3
1,594,323	-		Shew_1385	0.58	-0.0
1,594,410	-		Shew_1385	0.70	-0.0
1,594,450	+		Shew_1385	0.76	-0.2
1,594,772	-				-0.3
1,595,131	-		Shew_1386	0.22	-0.4
1,595,156	+		Shew_1386	0.23	+2.2
1,595,531	-		Shew_1386	0.40	+1.2
1,595,615	+		Shew_1386	0.43	+0.8
1,596,323	-		Shew_1386	0.75	-0.2
1,596,640	-		Shew_1386	0.89	+0.6
1,596,778	-				+0.2
1,596,912	-				+0.2
1,596,923	+				+1.1
1,597,785	+		Shew_1387	0.73	+0.3