Strain Fitness in Shewanella loihica PV-4 around Shew_1357

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,565,719	-		Shew_1356	0.11	+0.3
1,565,722	-		Shew_1356	0.11	-0.4
1,565,818	-		Shew_1356	0.23	+0.6
1,565,909	-		Shew_1356	0.34	+0.4
1,566,250	+		Shew_1356	0.75	+0.0
1,566,258	-		Shew_1356	0.76	+0.1
1,566,391	+				+0.4
1,566,409	-				-0.3
1,566,482	+				+0.4
1,566,639	+				+0.6
1,566,639	+				+0.5
1,566,639	+				+0.7
1,566,639	+				+0.7
1,566,639	+				+0.5
1,566,639	+				+1.8
1,566,647	-				+0.1
1,566,647	-				+0.4
1,566,647	-				+0.1
1,566,647	-				+0.3
1,566,661	-				+1.0
1,566,661	-				+0.4
1,567,003	+		Shew_1357	0.38	+0.6
1,567,308	+		Shew_1357	0.75	+0.4
1,567,355	+		Shew_1357	0.81	+0.3
1,567,363	-		Shew_1357	0.82	+0.8
1,567,363	-		Shew_1357	0.82	+0.4
1,567,539	+				+0.3
1,567,601	+				+0.3
1,567,948	-		Shew_1358	0.86	-0.6
1,568,005	-				+0.6