Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS08915

Experiment: Urea (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Urea (N)
1,974,815	+		PFLU_RS08910	0.58	+1.5
1,974,815	+		PFLU_RS08910	0.58	-0.7
1,974,815	+		PFLU_RS08910	0.58	-0.1
1,974,815	+		PFLU_RS08910	0.58	+1.1
1,974,815	+		PFLU_RS08910	0.58	+0.3
1,974,815	+		PFLU_RS08910	0.58	-1.3
1,974,815	+		PFLU_RS08910	0.58	+2.5
1,974,815	+		PFLU_RS08910	0.58	+1.0
1,974,815	+		PFLU_RS08910	0.58	-0.3
1,974,815	+		PFLU_RS08910	0.58	-0.2
1,974,815	+		PFLU_RS08910	0.58	+0.3
1,974,816	-		PFLU_RS08910	0.58	-1.4
1,974,816	-		PFLU_RS08910	0.58	+0.3
1,974,816	-		PFLU_RS08910	0.58	-2.9
1,974,816	-		PFLU_RS08910	0.58	-0.6
1,974,816	-		PFLU_RS08910	0.58	-0.6
1,974,816	-		PFLU_RS08910	0.58	+0.8
1,974,816	-		PFLU_RS08910	0.58	-1.8
1,974,816	-		PFLU_RS08910	0.58	-0.2
1,974,816	-		PFLU_RS08910	0.58	+0.5
1,974,816	-		PFLU_RS08910	0.58	-0.3
1,974,816	-		PFLU_RS08910	0.58	-0.2
1,974,816	-		PFLU_RS08910	0.58	-0.8
1,974,816	-		PFLU_RS08910	0.58	-0.8
1,974,816	-		PFLU_RS08910	0.58	+0.1
1,974,942	+		PFLU_RS08910	0.66	+1.8
1,974,943	-		PFLU_RS08910	0.66	-0.2
1,975,150	+		PFLU_RS08910	0.79	-0.4
1,975,150	+		PFLU_RS08910	0.79	+1.5
1,975,150	+		PFLU_RS08910	0.79	-1.0
1,975,151	-		PFLU_RS08910	0.80	-0.6
1,975,151	-		PFLU_RS08910	0.80	+1.1
1,975,151	-		PFLU_RS08910	0.80	+1.7
1,975,203	+		PFLU_RS08910	0.83	+0.6
1,975,203	+		PFLU_RS08910	0.83	+0.5
1,975,203	+		PFLU_RS08910	0.83	-0.3
1,975,203	+		PFLU_RS08910	0.83	+0.5
1,975,203	+		PFLU_RS08910	0.83	-0.3
1,975,203	+		PFLU_RS08910	0.83	+1.8
1,975,203	+		PFLU_RS08910	0.83	+0.5
1,975,204	-		PFLU_RS08910	0.83	+0.0
1,975,204	-		PFLU_RS08910	0.83	-1.8
1,975,204	-		PFLU_RS08910	0.83	+1.5
1,975,204	-		PFLU_RS08910	0.83	-0.1
1,975,317	+				+0.5
1,975,318	-				-1.8
1,975,364	+				+1.1
1,975,364	+				-0.4
1,975,365	-				-0.1
1,975,365	-				+1.6
1,975,386	+				-0.5
1,975,387	-				+0.2
1,975,387	-				-2.1
1,975,387	-				-0.2
1,975,434	+				+0.1
1,975,435	-				+1.0
1,975,435	-				-2.6
1,975,477	+				-1.7
1,975,478	-				-2.4
1,975,478	-				+1.4
1,975,478	-				-3.0
1,975,537	+				-1.1
1,975,538	-				+0.3
1,975,538	-				-1.0
1,975,582	+				-1.3
1,975,582	+				+0.2
1,975,583	-				+1.6
1,975,583	-				-0.5
1,975,594	+				+1.2
1,975,595	-				+1.5
1,975,601	+				+1.5
1,975,601	+				+0.5
1,975,601	+				-0.7
1,975,601	+				-1.8
1,975,601	+				+0.1
1,975,601	+				+0.9
1,975,601	+				+0.3
1,975,601	+				-1.1
1,975,602	-				-0.4
1,975,602	-				+0.7
1,975,602	-				+0.1
1,975,602	-				-0.7
1,975,602	-				-1.5
1,975,602	-				+0.9
1,975,602	-				-0.4
1,975,602	-				+0.9
1,975,703	-				+1.2
1,975,743	+				-1.0
1,975,743	+				+0.3
1,975,743	+				-0.8
1,975,743	+				-0.1
1,975,743	+				+1.5
1,975,743	+				+0.3
1,975,743	+				+1.7
1,975,743	+				-2.0
1,975,743	+				+0.4
1,975,743	+				-0.8
1,975,743	+				-0.1
1,975,743	+				-0.9
1,975,743	+				+0.6
1,975,743	+				+0.8
1,975,743	+				+0.9
1,975,743	+				-0.2
1,975,743	+				+0.9
1,975,743	+				-0.6
1,975,743	+				-0.1
1,975,743	+				+1.5
1,975,743	+				-1.6
1,975,743	+				-1.1
1,975,744	-				-1.1
1,975,744	-				-0.2
1,975,744	-				+0.3
1,975,744	-				+2.1
1,975,744	-				+0.5
1,975,744	-				+0.0
1,975,744	-				-0.2
1,975,744	-				+1.5
1,975,744	-				+0.7
1,975,744	-				+2.2
1,975,744	-				+0.0
1,975,744	-				+0.7
1,975,744	-				-0.8
1,975,744	-				-0.1
1,975,744	-				-0.1
1,975,744	-				+0.9
1,975,744	-				+0.2
1,975,744	-				-1.3
1,975,744	-				-3.0
1,975,744	-				+0.3
1,975,744	-				-0.1
1,975,744	-				+1.2
1,975,744	-				-1.1
1,975,797	+				-1.1
1,975,797	+				-0.2
1,975,797	+				-1.1
1,975,797	+				+0.9
1,975,797	+				+0.9
1,975,797	+				+0.7
1,975,797	+				-1.7
1,975,797	+				-0.3
1,975,797	+				+0.1
1,975,797	+				+0.5
1,975,797	+				+0.5
1,975,798	-				-1.1
1,975,798	-				+0.2
1,975,798	-				+0.5
1,975,798	-				+3.8
1,975,798	-				+0.5
1,975,798	-				+1.5
1,975,798	-				-1.7
1,975,798	-				+0.8
1,975,798	-				-0.2
1,975,798	-				-0.9
1,975,798	-				+0.2
1,975,841	+				-0.1
1,975,841	+				+1.6
1,975,841	+				-1.6
1,975,841	+				+0.5
1,975,841	+				-0.0
1,975,841	+				+1.0
1,975,842	-				-2.0
1,975,842	-				-0.3
1,975,842	-				-0.5
1,975,842	-				-1.0
1,975,842	-				-2.0
1,975,842	-				+1.5
1,975,897	+		PFLU_RS08915	0.11	+1.9
1,975,897	+		PFLU_RS08915	0.11	-0.1
1,975,897	+		PFLU_RS08915	0.11	+1.8
1,975,898	-		PFLU_RS08915	0.11	+2.2
1,975,898	-		PFLU_RS08915	0.11	+2.1
1,975,970	-		PFLU_RS08915	0.20	+1.5
1,975,970	-		PFLU_RS08915	0.20	+1.0
1,975,970	-		PFLU_RS08915	0.20	+1.3
1,976,077	+		PFLU_RS08915	0.32	+1.1
1,976,078	-		PFLU_RS08915	0.33	-0.3
1,976,118	+		PFLU_RS08915	0.37	-0.8
1,976,119	-		PFLU_RS08915	0.37	+0.2
1,976,119	-		PFLU_RS08915	0.37	-1.1
1,976,158	+		PFLU_RS08915	0.42	+1.8
1,976,158	+		PFLU_RS08915	0.42	+1.7
1,976,159	-		PFLU_RS08915	0.42	+0.2
1,976,159	-		PFLU_RS08915	0.42	+0.8
1,976,159	-		PFLU_RS08915	0.42	-0.3
1,976,275	+		PFLU_RS08915	0.56	-0.6
1,976,287	+		PFLU_RS08915	0.57	-0.8
1,976,287	+		PFLU_RS08915	0.57	-1.6
1,976,287	+		PFLU_RS08915	0.57	+1.2
1,976,287	+		PFLU_RS08915	0.57	+0.3
1,976,287	+		PFLU_RS08915	0.57	+0.9
1,976,288	-		PFLU_RS08915	0.57	+0.7
1,976,288	-		PFLU_RS08915	0.57	-0.5
1,976,288	-		PFLU_RS08915	0.57	+0.6
1,976,288	-		PFLU_RS08915	0.57	+1.1
1,976,288	-		PFLU_RS08915	0.57	-0.5
1,976,288	-		PFLU_RS08915	0.57	+0.1
1,976,288	-		PFLU_RS08915	0.57	+1.0
1,976,288	-		PFLU_RS08915	0.57	+0.4
1,976,288	-		PFLU_RS08915	0.57	+1.5
1,976,288	-		PFLU_RS08915	0.57	+1.6
1,976,437	+		PFLU_RS08915	0.75	+0.5
1,976,437	+		PFLU_RS08915	0.75	-0.6
1,976,437	+		PFLU_RS08915	0.75	-0.7
1,976,437	+		PFLU_RS08915	0.75	+0.5
1,976,437	+		PFLU_RS08915	0.75	+1.0
1,976,437	+		PFLU_RS08915	0.75	-1.8
1,976,437	+		PFLU_RS08915	0.75	+1.9
1,976,437	+		PFLU_RS08915	0.75	+0.3
1,976,437	+		PFLU_RS08915	0.75	+0.9
1,976,437	+		PFLU_RS08915	0.75	+0.5
1,976,437	+		PFLU_RS08915	0.75	-0.5
1,976,437	+		PFLU_RS08915	0.75	+0.4
1,976,437	+		PFLU_RS08915	0.75	+1.0
1,976,438	-		PFLU_RS08915	0.75	+1.2
1,976,438	-		PFLU_RS08915	0.75	-2.3
1,976,438	-		PFLU_RS08915	0.75	-1.6
1,976,438	-		PFLU_RS08915	0.75	-1.6
1,976,438	-		PFLU_RS08915	0.75	+0.3
1,976,438	-		PFLU_RS08915	0.75	+1.5
1,976,438	-		PFLU_RS08915	0.75	+0.6
1,976,438	-		PFLU_RS08915	0.75	-0.5
1,976,438	-		PFLU_RS08915	0.75	+1.9
1,976,566	-		PFLU_RS08915	0.90	+1.3
1,976,646	+				+0.2
1,976,646	+				+2.6
1,976,646	+				+0.8
1,976,647	-				+0.1
1,976,647	-				+2.0
1,976,650	+				-2.4
1,976,650	+				-0.3
1,976,650	+				+1.0
1,976,650	+				-2.0
1,976,650	+				-2.7
1,976,651	-				+2.5
1,976,651	-				-0.8
1,976,651	-				-0.5
1,976,651	-				+0.7
1,976,669	+				-1.5
1,976,669	+				-1.5
1,976,669	+				+1.2
1,976,669	+				+1.7
1,976,669	+				+0.2
1,976,669	+				+0.6
1,976,669	+				+1.2
1,976,669	+				+1.5
1,976,669	+				+1.7
1,976,669	+				-1.1
1,976,669	+				+0.8
1,976,669	+				+0.3
1,976,670	-				-0.1
1,976,670	-				-2.3
1,976,670	-				+0.3
1,976,670	-				+0.5
1,976,670	-				-1.0
1,976,670	-				-0.6
1,976,670	-				+0.0
1,976,670	-				+0.8
1,976,670	-				+0.5
1,976,670	-				+0.6
1,976,670	-				-2.1
1,976,670	-				+1.5
1,976,670	-				+1.5
1,976,670	-				+0.8
1,976,670	-				+0.6
1,976,727	+				-1.1
1,976,727	+				+1.0
1,976,728	-				+0.5
1,976,728	-				+0.1
1,976,728	-				+1.0
1,976,768	+				-2.2
1,976,769	-				+1.0
1,976,769	-				-1.5
1,976,814	+				+1.2
1,976,815	-				-1.4
1,976,815	-				+0.5
1,976,815	-				+0.7
1,976,825	+				+1.3
1,976,825	+				+0.9
1,976,825	+				-0.1
1,976,825	+				-0.3
1,976,826	-				-0.6
1,976,826	-				+0.9
1,976,826	-				-0.8
1,976,826	-				+0.2
1,976,828	+				+0.9
1,976,828	+				+0.7
1,976,828	+				-1.1
1,976,828	+				+0.8
1,976,828	+				+1.5
1,976,828	+				-0.6
1,976,828	+				+0.7
1,976,828	+				+1.5
1,976,828	+				+0.2
1,976,828	+				+0.5
1,976,828	+				+1.1
1,976,828	+				+1.0
1,976,828	+				+0.7
1,976,829	-				+0.2
1,976,829	-				-1.3
1,976,829	-				-0.2
1,976,829	-				-0.1
1,976,829	-				+0.4
1,976,829	-				+2.0
1,976,829	-				+0.6
1,976,829	-				+1.0
1,976,829	-				-0.0
1,976,829	-				-1.0
1,976,829	-				+0.2
1,976,829	-				+0.3
1,976,829	-				-0.5
1,976,831	+				-0.1
1,976,831	+				+3.5
1,976,831	+				-0.1
1,976,831	+				-1.1
1,976,831	+				+0.7
1,976,831	+				+0.3
1,976,831	+				+0.2
1,976,831	+				-1.5
1,976,831	+				+0.3
1,976,831	+				+0.5
1,976,831	+				+0.9
1,976,831	+				-0.4
1,976,831	+				-2.5
1,976,832	-				+1.2
1,976,832	-				-0.9
1,976,832	-				+1.7
1,976,832	-				+0.3
1,976,832	-				+0.6
1,976,832	-				+1.1
1,976,832	-				+0.8
1,976,832	-				+1.2
1,976,832	-				+0.9
1,976,832	-				-0.3
1,976,832	-				+0.7
1,976,863	+				+2.5
1,976,863	+				-1.1
1,976,863	+				-0.2
1,976,863	+				-0.9
1,976,863	+				+1.7
1,976,863	+				+0.1
1,976,864	-				-0.8
1,976,864	-				+1.9
1,976,864	-				-0.3
1,976,864	-				-3.0
1,976,864	-				-2.0
1,976,864	-				+0.1
1,976,864	-				+1.1
1,976,872	+				+1.9
1,976,872	+				+0.6
1,976,872	+				-0.0
1,976,873	-				-1.5
1,976,873	-				+0.9
1,976,873	-				-1.7
1,976,873	-				-0.1
1,976,883	-				-2.5
1,976,883	-				-1.7
1,976,885	+				-0.5
1,976,886	-				+2.5
1,976,886	-				-0.5
1,976,886	-				+0.6
1,976,930	+				+1.5
1,976,930	+				-0.6
1,976,930	+				-2.2
1,976,930	+				-0.5
1,976,930	+				-0.7
1,976,930	+				+0.2
1,976,931	-				+0.9
1,976,931	-				-0.9
1,976,931	-				-0.9
1,976,931	-				+1.2
1,976,931	-				+1.5
1,977,015	+		PFLU_RS08920	0.32	-0.1
1,977,023	+		PFLU_RS08920	0.35	-0.8
1,977,063	+		PFLU_RS08920	0.47	+1.5
1,977,063	+		PFLU_RS08920	0.47	+1.2
1,977,063	+		PFLU_RS08920	0.47	-0.3
1,977,064	-		PFLU_RS08920	0.48	+1.3
1,977,064	-		PFLU_RS08920	0.48	+1.2
1,977,064	-		PFLU_RS08920	0.48	+0.1
1,977,064	-		PFLU_RS08920	0.48	-1.8
1,977,064	-		PFLU_RS08920	0.48	-0.7
1,977,097	+		PFLU_RS08920	0.58	+0.0
1,977,097	+		PFLU_RS08920	0.58	-0.8
1,977,158	+		PFLU_RS08920	0.78	-0.3
1,977,158	+		PFLU_RS08920	0.78	+0.8
1,977,158	+		PFLU_RS08920	0.78	+0.6
1,977,158	+		PFLU_RS08920	0.78	-0.5
1,977,158	+		PFLU_RS08920	0.78	-1.5
1,977,158	+		PFLU_RS08920	0.78	+0.1
1,977,158	+		PFLU_RS08920	0.78	+1.2
1,977,158	+		PFLU_RS08920	0.78	+1.2
1,977,158	+		PFLU_RS08920	0.78	+1.5
1,977,158	+		PFLU_RS08920	0.78	-1.4
1,977,158	+		PFLU_RS08920	0.78	+0.2
1,977,158	+		PFLU_RS08920	0.78	-0.6
1,977,158	+		PFLU_RS08920	0.78	+0.6
1,977,158	+		PFLU_RS08920	0.78	-1.5
1,977,158	+		PFLU_RS08920	0.78	+0.1
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1,977,644	-		PFLU_RS08925	0.25	-2.1