Experiment: Thallium(I) acetate 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2823 and Ga0059261_2824 overlap by 4 nucleotides Ga0059261_2824 and Ga0059261_2825 overlap by 1 nucleotides Ga0059261_2825 and Ga0059261_2826 are separated by 132 nucleotides Ga0059261_2826 and Ga0059261_2827 overlap by 13 nucleotides
Ga0059261_2823: Ga0059261_2823 - Probable taurine catabolism dioxygenase, at 2,932,856 to 2,933,710
_2823
Ga0059261_2824: Ga0059261_2824 - NADPH:quinone reductase and related Zn-dependent oxidoreductases, at 2,933,707 to 2,934,702
_2824
Ga0059261_2825: Ga0059261_2825 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 2,934,702 to 2,935,436
_2825
Ga0059261_2826: Ga0059261_2826 - transcriptional regulator, TetR family, at 2,935,569 to 2,936,168
_2826
Ga0059261_2827: Ga0059261_2827 - 3-hydroxyacyl-CoA dehydrogenase, at 2,936,156 to 2,938,207
_2827
Position (kb)
2934
2935
2936 Strain fitness (log2 ratio)
-2
-1
0
1 at 2933.808 kb on + strand, within Ga0059261_2824 at 2933.808 kb on + strand, within Ga0059261_2824 at 2933.808 kb on + strand, within Ga0059261_2824 at 2933.809 kb on - strand, within Ga0059261_2824 at 2933.809 kb on - strand, within Ga0059261_2824 at 2933.809 kb on - strand, within Ga0059261_2824 at 2933.809 kb on - strand, within Ga0059261_2824 at 2933.858 kb on + strand, within Ga0059261_2824 at 2933.858 kb on + strand, within Ga0059261_2824 at 2933.859 kb on - strand, within Ga0059261_2824 at 2933.859 kb on - strand, within Ga0059261_2824 at 2933.859 kb on - strand, within Ga0059261_2824 at 2933.859 kb on - strand, within Ga0059261_2824 at 2933.859 kb on - strand, within Ga0059261_2824 at 2933.859 kb on - strand, within Ga0059261_2824 at 2933.859 kb on - strand, within Ga0059261_2824 at 2933.900 kb on + strand, within Ga0059261_2824 at 2933.901 kb on - strand, within Ga0059261_2824 at 2934.132 kb on - strand, within Ga0059261_2824 at 2934.132 kb on - strand, within Ga0059261_2824 at 2934.135 kb on + strand, within Ga0059261_2824 at 2934.135 kb on + strand, within Ga0059261_2824 at 2934.135 kb on + strand, within Ga0059261_2824 at 2934.135 kb on + strand, within Ga0059261_2824 at 2934.136 kb on - strand, within Ga0059261_2824 at 2934.136 kb on - strand, within Ga0059261_2824 at 2934.136 kb on - strand, within Ga0059261_2824 at 2934.136 kb on - strand, within Ga0059261_2824 at 2934.136 kb on - strand, within Ga0059261_2824 at 2934.136 kb on - strand, within Ga0059261_2824 at 2934.136 kb on - strand, within Ga0059261_2824 at 2934.136 kb on - strand, within Ga0059261_2824 at 2934.192 kb on + strand, within Ga0059261_2824 at 2934.193 kb on - strand, within Ga0059261_2824 at 2934.193 kb on - strand, within Ga0059261_2824 at 2934.193 kb on - strand, within Ga0059261_2824 at 2934.268 kb on + strand, within Ga0059261_2824 at 2934.268 kb on + strand, within Ga0059261_2824 at 2934.268 kb on + strand, within Ga0059261_2824 at 2934.268 kb on + strand, within Ga0059261_2824 at 2934.269 kb on - strand, within Ga0059261_2824 at 2934.269 kb on - strand, within Ga0059261_2824 at 2934.269 kb on - strand, within Ga0059261_2824 at 2934.269 kb on - strand, within Ga0059261_2824 at 2934.269 kb on - strand, within Ga0059261_2824 at 2934.269 kb on - strand, within Ga0059261_2824 at 2934.317 kb on + strand, within Ga0059261_2824 at 2934.318 kb on - strand, within Ga0059261_2824 at 2934.318 kb on - strand, within Ga0059261_2824 at 2934.474 kb on + strand, within Ga0059261_2824 at 2934.551 kb on + strand, within Ga0059261_2824 at 2934.551 kb on + strand, within Ga0059261_2824 at 2934.551 kb on + strand, within Ga0059261_2824 at 2934.551 kb on + strand, within Ga0059261_2824 at 2934.552 kb on - strand, within Ga0059261_2824 at 2934.581 kb on + strand, within Ga0059261_2824 at 2934.707 kb on + strand at 2934.707 kb on + strand at 2934.707 kb on + strand at 2934.708 kb on - strand at 2934.742 kb on + strand at 2934.742 kb on + strand at 2934.742 kb on + strand at 2934.743 kb on - strand at 2934.743 kb on - strand at 2934.743 kb on - strand at 2934.743 kb on - strand at 2934.766 kb on + strand at 2934.766 kb on + strand at 2934.766 kb on + strand at 2934.766 kb on + strand at 2934.766 kb on + strand at 2934.767 kb on - strand at 2934.767 kb on - strand at 2934.767 kb on - strand at 2934.767 kb on - strand at 2934.767 kb on - strand at 2934.767 kb on - strand at 2934.839 kb on + strand, within Ga0059261_2825 at 2934.843 kb on + strand, within Ga0059261_2825 at 2934.843 kb on + strand, within Ga0059261_2825 at 2934.844 kb on - strand, within Ga0059261_2825 at 2934.844 kb on - strand, within Ga0059261_2825 at 2934.875 kb on + strand, within Ga0059261_2825 at 2934.875 kb on + strand, within Ga0059261_2825 at 2934.875 kb on + strand, within Ga0059261_2825 at 2934.967 kb on + strand, within Ga0059261_2825 at 2934.967 kb on + strand, within Ga0059261_2825 at 2934.967 kb on + strand, within Ga0059261_2825 at 2934.968 kb on - strand, within Ga0059261_2825 at 2935.545 kb on + strand at 2935.545 kb on + strand at 2935.545 kb on + strand at 2935.545 kb on + strand at 2935.545 kb on + strand at 2935.545 kb on + strand at 2935.545 kb on + strand at 2935.545 kb on + strand at 2935.545 kb on + strand at 2935.545 kb on + strand at 2935.545 kb on + strand at 2935.545 kb on + strand at 2935.545 kb on + strand at 2935.545 kb on + strand at 2935.545 kb on + strand at 2935.545 kb on + strand at 2935.545 kb on + strand at 2935.545 kb on + strand at 2935.545 kb on + strand at 2935.546 kb on - strand at 2935.546 kb on - strand at 2935.546 kb on - strand at 2935.546 kb on - strand at 2935.546 kb on - strand at 2935.546 kb on - strand at 2935.546 kb on - strand at 2935.546 kb on - strand at 2935.546 kb on - strand at 2935.546 kb on - strand at 2935.547 kb on - strand at 2935.653 kb on + strand, within Ga0059261_2826 at 2935.653 kb on + strand, within Ga0059261_2826 at 2935.725 kb on + strand, within Ga0059261_2826 at 2935.725 kb on + strand, within Ga0059261_2826 at 2935.726 kb on - strand, within Ga0059261_2826 at 2935.726 kb on - strand, within Ga0059261_2826 at 2935.726 kb on - strand, within Ga0059261_2826 at 2935.726 kb on - strand, within Ga0059261_2826 at 2935.778 kb on + strand, within Ga0059261_2826 at 2935.778 kb on + strand, within Ga0059261_2826 at 2935.779 kb on - strand, within Ga0059261_2826 at 2935.863 kb on + strand, within Ga0059261_2826 at 2935.863 kb on + strand, within Ga0059261_2826 at 2935.864 kb on - strand, within Ga0059261_2826 at 2935.864 kb on - strand, within Ga0059261_2826 at 2935.864 kb on - strand at 2935.864 kb on - strand, within Ga0059261_2826 at 2935.864 kb on - strand, within Ga0059261_2826 at 2936.166 kb on + strand at 2936.166 kb on + strand at 2936.208 kb on - strand at 2936.208 kb on - strand at 2936.208 kb on - strand at 2936.313 kb on + strand at 2936.351 kb on + strand at 2936.352 kb on - strand at 2936.352 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.01 mg/ml remove 2,933,808 + Ga0059261_2824 0.10 -0.4 2,933,808 + Ga0059261_2824 0.10 +1.2 2,933,808 + Ga0059261_2824 0.10 +0.1 2,933,809 - Ga0059261_2824 0.10 -0.3 2,933,809 - Ga0059261_2824 0.10 -0.5 2,933,809 - Ga0059261_2824 0.10 +0.3 2,933,809 - Ga0059261_2824 0.10 -0.9 2,933,858 + Ga0059261_2824 0.15 -0.4 2,933,858 + Ga0059261_2824 0.15 +0.8 2,933,859 - Ga0059261_2824 0.15 +0.7 2,933,859 - Ga0059261_2824 0.15 -1.2 2,933,859 - Ga0059261_2824 0.15 +0.4 2,933,859 - Ga0059261_2824 0.15 -0.7 2,933,859 - Ga0059261_2824 0.15 -0.5 2,933,859 - Ga0059261_2824 0.15 -0.6 2,933,859 - Ga0059261_2824 0.15 +0.6 2,933,900 + Ga0059261_2824 0.19 +0.4 2,933,901 - Ga0059261_2824 0.19 -0.4 2,934,132 - Ga0059261_2824 0.43 +0.4 2,934,132 - Ga0059261_2824 0.43 -0.7 2,934,135 + Ga0059261_2824 0.43 -0.4 2,934,135 + Ga0059261_2824 0.43 +0.1 2,934,135 + Ga0059261_2824 0.43 +0.1 2,934,135 + Ga0059261_2824 0.43 -0.2 2,934,136 - Ga0059261_2824 0.43 -0.3 2,934,136 - Ga0059261_2824 0.43 -0.3 2,934,136 - Ga0059261_2824 0.43 -0.2 2,934,136 - Ga0059261_2824 0.43 -1.6 2,934,136 - Ga0059261_2824 0.43 -1.0 2,934,136 - Ga0059261_2824 0.43 -0.4 2,934,136 - Ga0059261_2824 0.43 -0.2 2,934,136 - Ga0059261_2824 0.43 -0.1 2,934,192 + Ga0059261_2824 0.49 -0.5 2,934,193 - Ga0059261_2824 0.49 -0.2 2,934,193 - Ga0059261_2824 0.49 -1.1 2,934,193 - Ga0059261_2824 0.49 -1.2 2,934,268 + Ga0059261_2824 0.56 +0.3 2,934,268 + Ga0059261_2824 0.56 -0.2 2,934,268 + Ga0059261_2824 0.56 -0.3 2,934,268 + Ga0059261_2824 0.56 +0.2 2,934,269 - Ga0059261_2824 0.56 -0.1 2,934,269 - Ga0059261_2824 0.56 +0.1 2,934,269 - Ga0059261_2824 0.56 -0.0 2,934,269 - Ga0059261_2824 0.56 -0.1 2,934,269 - Ga0059261_2824 0.56 +0.4 2,934,269 - Ga0059261_2824 0.56 -0.4 2,934,317 + Ga0059261_2824 0.61 -0.3 2,934,318 - Ga0059261_2824 0.61 -0.2 2,934,318 - Ga0059261_2824 0.61 -0.6 2,934,474 + Ga0059261_2824 0.77 +0.4 2,934,551 + Ga0059261_2824 0.85 +0.6 2,934,551 + Ga0059261_2824 0.85 -0.3 2,934,551 + Ga0059261_2824 0.85 -0.4 2,934,551 + Ga0059261_2824 0.85 -0.2 2,934,552 - Ga0059261_2824 0.85 +0.0 2,934,581 + Ga0059261_2824 0.88 +0.2 2,934,707 + -0.9 2,934,707 + +0.8 2,934,707 + -0.2 2,934,708 - +0.7 2,934,742 + +0.4 2,934,742 + +0.6 2,934,742 + +0.0 2,934,743 - -0.1 2,934,743 - +0.3 2,934,743 - -0.2 2,934,743 - +1.3 2,934,766 + -1.0 2,934,766 + -1.2 2,934,766 + -1.0 2,934,766 + +0.1 2,934,766 + +0.3 2,934,767 - +0.5 2,934,767 - +0.2 2,934,767 - -0.0 2,934,767 - +0.3 2,934,767 - -0.2 2,934,767 - -1.0 2,934,839 + Ga0059261_2825 0.19 +0.4 2,934,843 + Ga0059261_2825 0.19 -0.2 2,934,843 + Ga0059261_2825 0.19 -0.4 2,934,844 - Ga0059261_2825 0.19 +0.1 2,934,844 - Ga0059261_2825 0.19 -0.3 2,934,875 + Ga0059261_2825 0.24 -0.2 2,934,875 + Ga0059261_2825 0.24 +1.6 2,934,875 + Ga0059261_2825 0.24 +0.3 2,934,967 + Ga0059261_2825 0.36 +0.2 2,934,967 + Ga0059261_2825 0.36 -0.6 2,934,967 + Ga0059261_2825 0.36 -0.1 2,934,968 - Ga0059261_2825 0.36 -1.7 2,935,545 + +0.3 2,935,545 + +0.2 2,935,545 + +0.4 2,935,545 + -1.9 2,935,545 + -0.9 2,935,545 + +0.0 2,935,545 + -1.0 2,935,545 + +0.1 2,935,545 + +1.1 2,935,545 + -0.1 2,935,545 + +0.0 2,935,545 + +0.4 2,935,545 + +0.4 2,935,545 + -0.6 2,935,545 + +0.4 2,935,545 + +1.6 2,935,545 + -0.3 2,935,545 + +0.4 2,935,545 + +0.3 2,935,546 - +0.7 2,935,546 - -0.6 2,935,546 - +0.3 2,935,546 - +0.0 2,935,546 - +0.0 2,935,546 - +0.1 2,935,546 - -0.6 2,935,546 - +0.2 2,935,546 - -1.0 2,935,546 - -0.0 2,935,547 - -0.4 2,935,653 + Ga0059261_2826 0.14 +0.5 2,935,653 + Ga0059261_2826 0.14 +0.7 2,935,725 + Ga0059261_2826 0.26 +0.3 2,935,725 + Ga0059261_2826 0.26 +0.3 2,935,726 - Ga0059261_2826 0.26 +0.9 2,935,726 - Ga0059261_2826 0.26 -0.2 2,935,726 - Ga0059261_2826 0.26 +0.7 2,935,726 - Ga0059261_2826 0.26 +0.3 2,935,778 + Ga0059261_2826 0.35 +0.0 2,935,778 + Ga0059261_2826 0.35 -0.2 2,935,779 - Ga0059261_2826 0.35 +0.4 2,935,863 + Ga0059261_2826 0.49 -0.4 2,935,863 + Ga0059261_2826 0.49 +0.2 2,935,864 - Ga0059261_2826 0.49 -0.6 2,935,864 - Ga0059261_2826 0.49 +0.5 2,935,864 - +1.6 2,935,864 - Ga0059261_2826 0.49 -0.7 2,935,864 - Ga0059261_2826 0.49 +0.1 2,936,166 + +0.5 2,936,166 + -0.1 2,936,208 - +0.9 2,936,208 - -1.0 2,936,208 - +0.4 2,936,313 + +0.4 2,936,351 + +0.3 2,936,352 - +0.2 2,936,352 - -0.2
Or see this region's nucleotide sequence