Experiment: Thallium(I) acetate 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1120 and Ga0059261_1121 overlap by 4 nucleotides Ga0059261_1121 and Ga0059261_1122 overlap by 4 nucleotides Ga0059261_1122 and Ga0059261_1123 overlap by 17 nucleotides Ga0059261_1123 and Ga0059261_1124 are separated by 185 nucleotides Ga0059261_1124 and Ga0059261_1125 are separated by 177 nucleotides
Ga0059261_1120: Ga0059261_1120 - Chemotaxis protein histidine kinase and related kinases, at 1,144,341 to 1,146,467
_1120
Ga0059261_1121: Ga0059261_1121 - Response regulator receiver domain, at 1,146,464 to 1,146,829
_1121
Ga0059261_1122: Ga0059261_1122 - Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor), at 1,146,826 to 1,147,176
_1122
Ga0059261_1123: Ga0059261_1123 - flagellar motor stator protein MotA, at 1,147,160 to 1,148,044
_1123
Ga0059261_1124: Ga0059261_1124 - Flagellar biosynthesis regulator FlaF, at 1,148,230 to 1,148,592
_1124
Ga0059261_1125: Ga0059261_1125 - PAS domain S-box, at 1,148,770 to 1,151,502
_1125
Position (kb)
1147
1148
1149 Strain fitness (log2 ratio)
-2
-1
0
1 at 1146.221 kb on + strand, within Ga0059261_1120 at 1146.222 kb on - strand, within Ga0059261_1120 at 1146.222 kb on - strand, within Ga0059261_1120 at 1146.222 kb on - strand, within Ga0059261_1120 at 1146.799 kb on + strand at 1146.799 kb on + strand at 1146.800 kb on - strand at 1146.800 kb on - strand at 1147.048 kb on + strand, within Ga0059261_1122 at 1147.049 kb on - strand, within Ga0059261_1122 at 1147.049 kb on - strand, within Ga0059261_1122 at 1147.233 kb on + strand at 1147.326 kb on + strand, within Ga0059261_1123 at 1147.327 kb on - strand, within Ga0059261_1123 at 1147.327 kb on - strand, within Ga0059261_1123 at 1147.327 kb on - strand, within Ga0059261_1123 at 1147.390 kb on - strand, within Ga0059261_1123 at 1147.390 kb on - strand, within Ga0059261_1123 at 1147.390 kb on - strand, within Ga0059261_1123 at 1147.653 kb on + strand, within Ga0059261_1123 at 1147.654 kb on - strand, within Ga0059261_1123 at 1147.702 kb on - strand, within Ga0059261_1123 at 1147.791 kb on + strand, within Ga0059261_1123 at 1147.792 kb on - strand, within Ga0059261_1123 at 1147.792 kb on - strand, within Ga0059261_1123 at 1147.792 kb on - strand, within Ga0059261_1123 at 1147.835 kb on + strand, within Ga0059261_1123 at 1147.835 kb on + strand, within Ga0059261_1123 at 1147.835 kb on + strand, within Ga0059261_1123 at 1147.835 kb on + strand, within Ga0059261_1123 at 1147.835 kb on + strand, within Ga0059261_1123 at 1147.836 kb on - strand, within Ga0059261_1123 at 1147.836 kb on - strand, within Ga0059261_1123 at 1148.088 kb on + strand at 1148.088 kb on + strand at 1148.088 kb on + strand at 1148.088 kb on + strand at 1148.089 kb on - strand at 1148.089 kb on - strand at 1148.089 kb on - strand at 1148.090 kb on + strand at 1148.090 kb on + strand at 1148.090 kb on + strand at 1148.091 kb on - strand at 1148.091 kb on - strand at 1148.091 kb on - strand at 1148.091 kb on - strand at 1148.091 kb on - strand at 1148.196 kb on + strand at 1148.196 kb on + strand at 1148.196 kb on + strand at 1148.196 kb on + strand at 1148.197 kb on - strand at 1148.197 kb on - strand at 1148.197 kb on - strand at 1148.197 kb on - strand at 1148.197 kb on - strand at 1148.197 kb on - strand at 1148.199 kb on - strand at 1148.199 kb on - strand at 1148.199 kb on - strand at 1148.209 kb on + strand at 1148.291 kb on - strand, within Ga0059261_1124 at 1148.291 kb on - strand, within Ga0059261_1124 at 1148.379 kb on + strand, within Ga0059261_1124 at 1148.379 kb on + strand, within Ga0059261_1124 at 1148.380 kb on - strand, within Ga0059261_1124 at 1148.380 kb on - strand, within Ga0059261_1124 at 1148.380 kb on - strand, within Ga0059261_1124 at 1148.461 kb on - strand, within Ga0059261_1124 at 1148.461 kb on - strand, within Ga0059261_1124 at 1148.490 kb on + strand, within Ga0059261_1124 at 1148.490 kb on + strand, within Ga0059261_1124 at 1148.491 kb on - strand, within Ga0059261_1124 at 1148.491 kb on - strand, within Ga0059261_1124 at 1148.537 kb on + strand, within Ga0059261_1124 at 1148.537 kb on + strand, within Ga0059261_1124 at 1148.537 kb on + strand, within Ga0059261_1124 at 1148.537 kb on + strand, within Ga0059261_1124 at 1148.537 kb on + strand, within Ga0059261_1124 at 1148.538 kb on - strand, within Ga0059261_1124 at 1148.538 kb on - strand, within Ga0059261_1124 at 1148.597 kb on - strand at 1148.631 kb on + strand at 1148.642 kb on + strand at 1148.642 kb on + strand at 1148.642 kb on + strand at 1148.643 kb on - strand at 1148.643 kb on - strand at 1148.644 kb on + strand at 1148.645 kb on - strand at 1148.646 kb on + strand at 1148.647 kb on - strand at 1148.647 kb on - strand at 1148.653 kb on - strand at 1148.676 kb on + strand at 1148.690 kb on + strand at 1148.740 kb on + strand at 1148.741 kb on - strand at 1148.775 kb on + strand at 1148.813 kb on + strand at 1148.813 kb on + strand at 1148.813 kb on + strand at 1148.814 kb on - strand at 1148.814 kb on - strand at 1148.826 kb on + strand at 1148.826 kb on + strand at 1148.826 kb on + strand at 1148.827 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.01 mg/ml remove 1,146,221 + Ga0059261_1120 0.88 +0.1 1,146,222 - Ga0059261_1120 0.88 -0.3 1,146,222 - Ga0059261_1120 0.88 -0.8 1,146,222 - Ga0059261_1120 0.88 +0.5 1,146,799 + +0.1 1,146,799 + -0.2 1,146,800 - -1.9 1,146,800 - -0.2 1,147,048 + Ga0059261_1122 0.63 -0.3 1,147,049 - Ga0059261_1122 0.64 -0.2 1,147,049 - Ga0059261_1122 0.64 +0.1 1,147,233 + +0.3 1,147,326 + Ga0059261_1123 0.19 -0.3 1,147,327 - Ga0059261_1123 0.19 -0.4 1,147,327 - Ga0059261_1123 0.19 -0.3 1,147,327 - Ga0059261_1123 0.19 -0.4 1,147,390 - Ga0059261_1123 0.26 -0.0 1,147,390 - Ga0059261_1123 0.26 -1.3 1,147,390 - Ga0059261_1123 0.26 +0.4 1,147,653 + Ga0059261_1123 0.56 -0.1 1,147,654 - Ga0059261_1123 0.56 -2.6 1,147,702 - Ga0059261_1123 0.61 -0.6 1,147,791 + Ga0059261_1123 0.71 -0.1 1,147,792 - Ga0059261_1123 0.71 -0.1 1,147,792 - Ga0059261_1123 0.71 -1.4 1,147,792 - Ga0059261_1123 0.71 +0.5 1,147,835 + Ga0059261_1123 0.76 -0.4 1,147,835 + Ga0059261_1123 0.76 -0.0 1,147,835 + Ga0059261_1123 0.76 -1.6 1,147,835 + Ga0059261_1123 0.76 +0.8 1,147,835 + Ga0059261_1123 0.76 +0.2 1,147,836 - Ga0059261_1123 0.76 -1.0 1,147,836 - Ga0059261_1123 0.76 -0.4 1,148,088 + +0.1 1,148,088 + +1.6 1,148,088 + -0.5 1,148,088 + +0.0 1,148,089 - +0.1 1,148,089 - +0.8 1,148,089 - -0.6 1,148,090 + -1.7 1,148,090 + -0.9 1,148,090 + -0.4 1,148,091 - +0.1 1,148,091 - -0.1 1,148,091 - +0.7 1,148,091 - -0.3 1,148,091 - -0.0 1,148,196 + -0.1 1,148,196 + +0.2 1,148,196 + -0.0 1,148,196 + -0.4 1,148,197 - -0.8 1,148,197 - +0.5 1,148,197 - -2.1 1,148,197 - -1.0 1,148,197 - -0.0 1,148,197 - -0.0 1,148,199 - +1.1 1,148,199 - -0.2 1,148,199 - +0.5 1,148,209 + +0.5 1,148,291 - Ga0059261_1124 0.17 -0.8 1,148,291 - Ga0059261_1124 0.17 +1.2 1,148,379 + Ga0059261_1124 0.41 +0.0 1,148,379 + Ga0059261_1124 0.41 +0.1 1,148,380 - Ga0059261_1124 0.41 +0.0 1,148,380 - Ga0059261_1124 0.41 +0.3 1,148,380 - Ga0059261_1124 0.41 +0.0 1,148,461 - Ga0059261_1124 0.64 +0.0 1,148,461 - Ga0059261_1124 0.64 +1.2 1,148,490 + Ga0059261_1124 0.72 +0.1 1,148,490 + Ga0059261_1124 0.72 -0.8 1,148,491 - Ga0059261_1124 0.72 +0.5 1,148,491 - Ga0059261_1124 0.72 +0.5 1,148,537 + Ga0059261_1124 0.85 +0.3 1,148,537 + Ga0059261_1124 0.85 +0.2 1,148,537 + Ga0059261_1124 0.85 -0.0 1,148,537 + Ga0059261_1124 0.85 +0.0 1,148,537 + Ga0059261_1124 0.85 -0.2 1,148,538 - Ga0059261_1124 0.85 +0.0 1,148,538 - Ga0059261_1124 0.85 -0.6 1,148,597 - +1.1 1,148,631 + -0.6 1,148,642 + +0.2 1,148,642 + +0.3 1,148,642 + +0.1 1,148,643 - +0.8 1,148,643 - -1.2 1,148,644 + -0.3 1,148,645 - +0.0 1,148,646 + +0.6 1,148,647 - +0.7 1,148,647 - +0.3 1,148,653 - -0.4 1,148,676 + +1.2 1,148,690 + -0.4 1,148,740 + -0.8 1,148,741 - +0.2 1,148,775 + -0.2 1,148,813 + +0.2 1,148,813 + -0.4 1,148,813 + +0.2 1,148,814 - -1.1 1,148,814 - +0.9 1,148,826 + +0.5 1,148,826 + -1.4 1,148,826 + +0.0 1,148,827 - +0.0
Or see this region's nucleotide sequence