Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_19265

Experiment: A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.01 mg/ml
4,222,607	+		AO353_19260	0.28	-0.7
4,222,608	-		AO353_19260	0.29	-0.4
4,222,724	+		AO353_19260	0.38	-2.9
4,222,724	+		AO353_19260	0.38	-0.3
4,222,725	-		AO353_19260	0.38	+1.5
4,222,725	-		AO353_19260	0.38	-0.6
4,222,725	-		AO353_19260	0.38	-1.5
4,222,725	-		AO353_19260	0.38	+0.5
4,222,725	-		AO353_19260	0.38	-0.5
4,222,793	+		AO353_19260	0.44	+0.7
4,222,793	+		AO353_19260	0.44	-0.1
4,222,794	-		AO353_19260	0.44	+0.2
4,222,794	-		AO353_19260	0.44	+0.2
4,222,794	-		AO353_19260	0.44	+0.1
4,222,794	-		AO353_19260	0.44	-1.7
4,222,794	-		AO353_19260	0.44	-2.2
4,222,794	-		AO353_19260	0.44	+0.5
4,222,794	-		AO353_19260	0.44	-3.3
4,222,794	-		AO353_19260	0.44	-0.7
4,222,794	-		AO353_19260	0.44	-0.9
4,222,811	+		AO353_19260	0.45	-0.1
4,222,812	-		AO353_19260	0.45	+0.5
4,222,882	+		AO353_19260	0.51	+1.1
4,222,882	+		AO353_19260	0.51	+0.2
4,222,882	+		AO353_19260	0.51	-0.4
4,222,882	+		AO353_19260	0.51	-1.3
4,222,882	+		AO353_19260	0.51	+0.5
4,222,882	+		AO353_19260	0.51	-1.3
4,222,882	+		AO353_19260	0.51	+0.9
4,222,882	+		AO353_19260	0.51	+1.0
4,222,882	+		AO353_19260	0.51	+0.2
4,222,882	+		AO353_19260	0.51	-0.4
4,222,882	+		AO353_19260	0.51	-1.1
4,222,882	+		AO353_19260	0.51	-0.9
4,222,882	+		AO353_19260	0.51	-0.3
4,222,882	+		AO353_19260	0.51	-0.3
4,222,883	-		AO353_19260	0.51	+0.1
4,222,883	-		AO353_19260	0.51	-0.3
4,222,883	-		AO353_19260	0.51	+1.3
4,222,883	-		AO353_19260	0.51	-0.8
4,222,883	-		AO353_19260	0.51	+1.3
4,222,883	-		AO353_19260	0.51	+0.1
4,222,883	-		AO353_19260	0.51	-0.2
4,222,883	-		AO353_19260	0.51	+0.4
4,223,022	+		AO353_19260	0.62	-0.7
4,223,218	+		AO353_19260	0.78	-1.3
4,223,218	+		AO353_19260	0.78	-0.7
4,223,218	+		AO353_19260	0.78	+0.5
4,223,219	-		AO353_19260	0.78	-1.6
4,223,219	-		AO353_19260	0.78	+1.3
4,223,314	+		AO353_19260	0.86	-0.5
4,223,315	-		AO353_19260	0.86	+1.5
4,223,315	-		AO353_19260	0.86	-0.2
4,223,315	-		AO353_19260	0.86	+0.1
4,223,349	+		AO353_19260	0.89	-0.5
4,223,349	+		AO353_19260	0.89	+0.5
4,223,349	+		AO353_19260	0.89	+0.6
4,223,350	-		AO353_19260	0.89	+0.2
4,223,350	-		AO353_19260	0.89	+0.0
4,223,350	-		AO353_19260	0.89	-0.1
4,223,350	-		AO353_19260	0.89	-1.1
4,223,350	-		AO353_19260	0.89	-2.4
4,223,353	+		AO353_19260	0.89	+1.3
4,223,353	+		AO353_19260	0.89	-0.9
4,223,354	-		AO353_19260	0.89	-1.6
4,223,354	-		AO353_19260	0.89	-1.1
4,223,482	+				-0.8
4,223,482	+				-0.3
4,223,497	+				-1.8
4,223,568	+				-0.9
4,223,568	+				-1.1
4,223,568	+				-0.7
4,223,568	+				+1.5
4,223,569	-				+0.4
4,223,569	-				-0.5
4,223,569	-				-0.5
4,223,569	-				-0.0
4,223,569	-				+0.2
4,223,572	+				+1.0
4,223,572	+				+0.5
4,223,573	-				+0.5
4,223,700	+		AO353_19265	0.72	+0.9
4,223,701	-		AO353_19265	0.72	-0.9
4,223,701	-		AO353_19265	0.72	-0.2
4,223,701	-		AO353_19265	0.72	-0.3
4,223,714	+		AO353_19265	0.79	-1.9
4,223,714	+		AO353_19265	0.79	-0.2
4,223,714	+		AO353_19265	0.79	-1.4
4,223,715	-		AO353_19265	0.79	-0.3
4,223,715	-		AO353_19265	0.79	-1.0
4,223,715	-		AO353_19265	0.79	-0.3
4,223,715	-		AO353_19265	0.79	-0.3
4,223,715	-		AO353_19265	0.79	-1.6
4,223,737	+				-0.1
4,223,737	+				-0.3
4,223,851	+				+0.7
4,223,851	+				-2.3
4,223,851	+				+0.3
4,223,852	-				+1.1
4,223,852	-				-0.8
4,223,852	-				+0.1
4,223,852	-				-2.0
4,223,852	-				+0.9
4,223,869	+				-1.3
4,223,869	+				+1.3
4,223,870	-				-0.3
4,223,870	-				-0.0
4,223,870	-				+0.9
4,223,870	-				-0.4
4,223,870	-				-0.7
4,223,870	-				-0.5
4,223,870	-				-0.4
4,223,870	-				+0.1
4,223,892	+				-0.5
4,223,892	+				+0.8
4,223,892	+				+0.5
4,223,905	+				+0.1
4,223,906	-				-0.2
4,223,906	-				-1.5
4,223,906	-				-0.1
4,223,947	-				+0.5
4,223,947	-				-0.2
4,223,947	-				-0.6
4,223,947	-				-0.9
4,223,947	-				-1.2
4,223,965	+				-0.5
4,223,965	+				-0.4
4,223,966	-				+0.0
4,223,966	-				-1.6
4,223,966	-				+0.6
4,223,966	-				-1.1
4,223,966	-				+0.8
4,223,966	-				-0.1
4,223,966	-				+0.1
4,223,966	-				+0.5
4,223,995	+				+0.7
4,223,995	+				+0.8
4,223,995	+				-0.5
4,223,995	+				+0.2
4,223,996	-				+1.1
4,223,996	-				+0.4
4,223,996	-				+1.3
4,223,996	-				-0.5
4,223,996	-				-0.1
4,224,012	-				-1.3
4,224,012	-				+0.8
4,224,012	-				-0.8
4,224,012	-				+0.6
4,224,030	+				-1.1
4,224,030	+				-0.8
4,224,030	+				-0.2
4,224,030	+				+1.0
4,224,030	+				+0.2
4,224,030	+				-0.8
4,224,030	+				+0.3
4,224,030	+				+0.1
4,224,030	+				-0.5
4,224,031	-				-0.1
4,224,031	-				+0.7
4,224,031	-				+0.5
4,224,031	-				+0.9
4,224,031	-				-0.2
4,224,031	-				-0.8
4,224,056	+				-0.1
4,224,084	+				-1.8
4,224,084	+				+0.2
4,224,084	+				-0.3
4,224,085	-				+0.2
4,224,125	+				+0.5
4,224,126	-				-1.2
4,224,263	+		AO353_19270	0.27	+0.1
4,224,283	+		AO353_19270	0.30	+0.1
4,224,283	+		AO353_19270	0.30	-0.1
4,224,369	+		AO353_19270	0.43	+0.5
4,224,370	-		AO353_19270	0.43	-0.0
4,224,438	+		AO353_19270	0.54	+0.5
4,224,438	+		AO353_19270	0.54	-1.3
4,224,439	-		AO353_19270	0.54	+0.4
4,224,575	+		AO353_19270	0.75	+0.3
4,224,575	+				+0.5
4,224,575	+		AO353_19270	0.75	-1.3
4,224,575	+		AO353_19270	0.75	-1.2
4,224,575	+		AO353_19270	0.75	+0.4
4,224,575	+		AO353_19270	0.75	+1.5
4,224,575	+		AO353_19270	0.75	-2.1
4,224,575	+				+1.5
4,224,575	+		AO353_19270	0.75	+0.4
4,224,575	+		AO353_19270	0.75	+0.9
4,224,575	+		AO353_19270	0.75	-0.8
4,224,576	-		AO353_19270	0.75	+0.4
4,224,576	-		AO353_19270	0.75	-0.3
4,224,576	-		AO353_19270	0.75	-1.1
4,224,576	-		AO353_19270	0.75	+0.5
4,224,576	-		AO353_19270	0.75	-0.2
4,224,577	+		AO353_19270	0.75	-0.4
4,224,577	+		AO353_19270	0.75	+0.3
4,224,577	+		AO353_19270	0.75	+1.5
4,224,578	-		AO353_19270	0.75	-1.7
4,224,602	+		AO353_19270	0.79	+0.8
4,224,602	+		AO353_19270	0.79	-1.6
4,224,602	+		AO353_19270	0.79	+1.0
4,224,603	-		AO353_19270	0.79	-0.5
4,224,603	-		AO353_19270	0.79	-1.5
4,224,733	+				+0.9
4,224,734	-				-0.5
4,224,734	-				-1.9
4,224,734	-				+1.4
4,224,734	-				+0.2
4,224,753	+				-1.5
4,224,754	-				-0.5
4,224,754	-				+1.0