Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08970

Experiment: A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.01 mg/ml
1,968,854	+		AO353_08960	0.64	-0.8
1,968,854	+		AO353_08960	0.64	-0.4
1,968,854	+		AO353_08960	0.64	-0.6
1,968,854	+		AO353_08960	0.64	-1.6
1,968,854	+		AO353_08960	0.64	+0.2
1,968,855	-		AO353_08960	0.65	-0.1
1,968,855	-		AO353_08960	0.65	-0.6
1,968,855	-		AO353_08960	0.65	-0.6
1,968,855	-		AO353_08960	0.65	-0.4
1,969,007	+		AO353_08960	0.87	-0.9
1,969,008	-		AO353_08960	0.88	-0.6
1,969,008	-		AO353_08960	0.88	+0.7
1,969,144	+				+0.3
1,969,144	+				-0.5
1,969,144	+				+0.3
1,969,144	+				-1.0
1,969,144	+				+0.3
1,969,144	+				+0.4
1,969,144	+				+0.8
1,969,145	-				+0.8
1,969,145	-				-0.8
1,969,145	-				-0.3
1,969,145	-				+2.1
1,969,145	-				-1.5
1,969,145	-				+1.1
1,969,145	-				+0.1
1,969,344	+		AO353_08965	0.40	+0.1
1,969,344	+		AO353_08965	0.40	-1.0
1,969,375	+		AO353_08965	0.47	+0.5
1,969,376	-		AO353_08965	0.47	+0.3
1,969,376	-		AO353_08965	0.47	-0.7
1,969,376	-		AO353_08965	0.47	+0.7
1,969,376	-		AO353_08965	0.47	+0.9
1,969,413	+		AO353_08965	0.55	+0.1
1,969,414	-		AO353_08965	0.55	+0.9
1,969,414	-		AO353_08965	0.55	-0.4
1,969,440	+		AO353_08965	0.61	-0.6
1,969,440	+		AO353_08965	0.61	+0.8
1,969,440	+		AO353_08965	0.61	+0.6
1,969,441	-		AO353_08965	0.61	-1.5
1,969,441	-		AO353_08965	0.61	+1.0
1,969,441	-		AO353_08965	0.61	+0.3
1,969,441	-		AO353_08965	0.61	-0.8
1,969,441	-		AO353_08965	0.61	-0.1
1,969,521	+		AO353_08965	0.79	-0.6
1,969,521	+		AO353_08965	0.79	-1.5
1,969,521	+		AO353_08965	0.79	+1.0
1,969,521	+		AO353_08965	0.79	+2.3
1,969,521	+		AO353_08965	0.79	+0.8
1,969,521	+		AO353_08965	0.79	+0.4
1,969,521	+		AO353_08965	0.79	+0.1
1,969,522	-		AO353_08965	0.79	-0.9
1,969,522	-		AO353_08965	0.79	-0.0
1,969,522	-		AO353_08965	0.79	+0.4
1,969,522	-		AO353_08965	0.79	+0.3
1,969,522	-		AO353_08965	0.79	+1.2
1,969,522	-		AO353_08965	0.79	+1.3
1,969,522	-		AO353_08965	0.79	+0.1
1,969,522	-		AO353_08965	0.79	-0.7
1,969,722	+				-0.8
1,969,722	+				+0.8
1,969,722	+				+0.8
1,969,722	+				+1.1
1,969,722	+				+0.6
1,969,722	+				-0.3
1,969,723	-				-0.3
1,969,723	-				+0.9
1,969,723	-				-0.7
1,969,723	-				+1.1
1,969,723	-				-1.7
1,969,723	-				-0.4
1,969,723	-				+2.3
1,969,738	+				+0.8
1,969,739	-				-0.0
1,969,739	-				+0.8
1,969,739	-				-0.0
1,969,739	-				-1.4
1,969,765	+				+0.8
1,969,765	+				+1.1
1,969,765	+				+0.7
1,969,766	-				+1.2
1,969,776	+				-1.3
1,969,776	+				+0.7
1,969,776	+				+0.1
1,969,785	+				+1.4
1,969,785	+				+0.3
1,969,785	+				-2.3
1,969,785	+				+1.1
1,969,786	-				-1.2
1,969,786	-				+0.5
1,969,786	-				+0.3
1,969,786	-				-2.5
1,969,786	-				-0.4
1,969,786	-				+0.8
1,969,786	-				-0.0
1,969,786	-				+1.5
1,969,795	+				+1.4
1,969,795	+				+0.1
1,969,796	-				+0.1
1,969,796	-				-0.1
1,969,796	-				+0.4
1,969,847	-				+0.5
1,969,852	+		AO353_08970	0.11	-2.0
1,969,853	-		AO353_08970	0.11	-0.7
1,969,853	-		AO353_08970	0.11	+0.5
1,969,876	+		AO353_08970	0.15	+0.5
1,969,876	+		AO353_08970	0.15	-0.2
1,969,928	+		AO353_08970	0.24	+0.3
1,969,929	-		AO353_08970	0.24	+0.1
1,969,929	-		AO353_08970	0.24	+0.2
1,970,079	+		AO353_08970	0.52	-0.6
1,970,140	+		AO353_08970	0.63	-1.2
1,970,140	+		AO353_08970	0.63	+0.1
1,970,145	+		AO353_08970	0.64	-0.4
1,970,145	+		AO353_08970	0.64	-0.2
1,970,146	-		AO353_08970	0.64	-0.3
1,970,146	-		AO353_08970	0.64	-0.1
1,970,146	-		AO353_08970	0.64	-1.7
1,970,146	-		AO353_08970	0.64	-0.2
1,970,146	-		AO353_08970	0.64	-2.4
1,970,269	+		AO353_08970	0.86	+0.7
1,970,269	+		AO353_08970	0.86	-0.4
1,970,269	+		AO353_08970	0.86	-0.1
1,970,269	+		AO353_08970	0.86	-0.2
1,970,269	+		AO353_08970	0.86	-0.5
1,970,269	+		AO353_08970	0.86	-1.1
1,970,269	+		AO353_08970	0.86	-1.7
1,970,270	-		AO353_08970	0.86	-0.4
1,970,270	-		AO353_08970	0.86	-1.6
1,970,272	+		AO353_08970	0.87	+0.4
1,970,272	+		AO353_08970	0.87	-1.1
1,970,272	+		AO353_08970	0.87	-1.1
1,970,273	-		AO353_08970	0.87	+0.6
1,970,273	-		AO353_08970	0.87	-0.2
1,970,273	-		AO353_08970	0.87	+0.3
1,970,273	-		AO353_08970	0.87	+0.7
1,970,273	-		AO353_08970	0.87	-1.4
1,970,273	-		AO353_08970	0.87	+0.3
1,970,273	-		AO353_08970	0.87	-1.2
1,970,376	+				-0.2
1,970,376	+				-1.5
1,970,376	+				+1.5
1,970,376	+				-0.1
1,970,377	-				+0.2
1,970,377	-				-0.8
1,970,439	+				-0.4
1,970,439	+				+0.2
1,970,439	+				-0.5
1,970,440	-				-0.2
1,970,440	-				-0.1
1,970,474	+				+0.9
1,970,474	+				-1.2
1,970,474	+				+1.7
1,970,474	+				+1.0
1,970,474	+				-0.6
1,970,474	+				+2.5
1,970,474	+				-0.3
1,970,474	+				-2.0
1,970,475	-				-0.6
1,970,475	-				-0.5
1,970,475	-				-0.1
1,970,475	-				-0.5
1,970,475	-				-0.2
1,970,475	-				-0.5
1,970,475	-				+1.3
1,970,475	-				-0.9
1,970,484	+				-2.5
1,970,484	+				+0.1
1,970,484	+				+0.1
1,970,484	+				-0.5
1,970,484	+				-2.0
1,970,485	-				+0.8
1,970,485	-				-1.2
1,970,485	-				+0.7
1,970,485	-				+0.4
1,970,485	-				+1.2
1,970,485	-				+1.4
1,970,485	-				+0.9
1,970,485	-				+0.8
1,970,485	-				+0.1
1,970,485	-				+0.3
1,970,496	+				+1.1
1,970,496	+				+1.2
1,970,497	-				+1.0
1,970,498	+				-1.7
1,970,498	+				-0.6
1,970,523	+				+0.7
1,970,523	+				+0.1
1,970,577	+				+1.8
1,970,577	+				-1.1
1,970,578	-				-0.5
1,970,578	-				-1.1
1,970,578	-				+1.4
1,970,749	-		AO353_08975	0.14	-0.8
1,970,749	-		AO353_08975	0.14	-1.1
1,970,892	+		AO353_08975	0.26	-0.7
1,970,893	-		AO353_08975	0.26	-2.1
1,970,893	-		AO353_08975	0.26	-0.4
1,970,893	-		AO353_08975	0.26	+1.1
1,970,916	+		AO353_08975	0.27	-0.9
1,970,916	+		AO353_08975	0.27	-1.2
1,970,917	-		AO353_08975	0.28	-0.5
1,970,917	-		AO353_08975	0.28	+0.4
1,970,917	-		AO353_08975	0.28	-1.2
1,970,917	-		AO353_08975	0.28	-2.2
1,970,917	-		AO353_08975	0.28	-0.8
1,970,917	-		AO353_08975	0.28	-1.0
1,970,917	-		AO353_08975	0.28	-0.5
1,970,920	+		AO353_08975	0.28	-0.4
1,970,920	+		AO353_08975	0.28	-1.6
1,970,921	-		AO353_08975	0.28	-1.9
1,970,921	-		AO353_08975	0.28	-0.5
1,970,921	-		AO353_08975	0.28	-0.5
1,971,063	-		AO353_08975	0.39	-1.4
1,971,063	-		AO353_08975	0.39	-1.5
1,971,074	-		AO353_08975	0.40	-1.4
1,971,074	-		AO353_08975	0.40	-1.8