Experiment: A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02090 and AO353_02095 are separated by 63 nucleotides AO353_02095 and AO353_02100 are separated by 4 nucleotides AO353_02100 and AO353_02105 are separated by 175 nucleotides
AO353_02090: AO353_02090 - N-ethylammeline chlorohydrolase, at 447,614 to 448,945
_02090
AO353_02095: AO353_02095 - 3-demethylubiquinone-9 3-methyltransferase, at 449,009 to 449,707
_02095
AO353_02100: AO353_02100 - phosphoglycolate phosphatase, at 449,712 to 450,383
_02100
AO353_02105: AO353_02105 - 3-oxoacyl-ACP reductase, at 450,559 to 451,299
_02105
Position (kb) 449
450
451 Strain fitness (log2 ratio) -2
-1
0
1 at 448.795 kb on + strand, within AO353_02090 at 448.795 kb on + strand, within AO353_02090 at 448.795 kb on + strand, within AO353_02090 at 448.795 kb on + strand, within AO353_02090 at 448.795 kb on + strand, within AO353_02090 at 448.796 kb on - strand, within AO353_02090 at 448.796 kb on - strand, within AO353_02090 at 448.796 kb on - strand, within AO353_02090 at 448.796 kb on - strand, within AO353_02090 at 448.799 kb on + strand, within AO353_02090 at 448.799 kb on + strand, within AO353_02090 at 448.799 kb on + strand, within AO353_02090 at 448.800 kb on - strand, within AO353_02090 at 448.800 kb on - strand, within AO353_02090 at 448.800 kb on - strand, within AO353_02090 at 448.893 kb on + strand at 448.893 kb on + strand at 448.893 kb on + strand at 448.894 kb on - strand at 448.894 kb on - strand at 448.894 kb on - strand at 448.894 kb on - strand at 448.894 kb on - strand at 448.894 kb on - strand at 448.894 kb on - strand at 448.894 kb on - strand at 448.943 kb on + strand at 448.944 kb on - strand at 448.944 kb on - strand at 448.996 kb on + strand at 448.996 kb on + strand at 448.996 kb on + strand at 448.996 kb on + strand at 448.996 kb on + strand at 448.997 kb on - strand at 448.997 kb on - strand at 449.004 kb on + strand at 449.705 kb on + strand at 449.705 kb on + strand at 449.705 kb on + strand at 449.706 kb on - strand at 450.160 kb on + strand, within AO353_02100 at 450.160 kb on + strand, within AO353_02100 at 450.161 kb on - strand, within AO353_02100 at 450.161 kb on - strand, within AO353_02100 at 450.279 kb on + strand, within AO353_02100 at 450.279 kb on + strand, within AO353_02100 at 450.279 kb on + strand, within AO353_02100 at 450.279 kb on + strand, within AO353_02100 at 450.280 kb on - strand, within AO353_02100 at 450.374 kb on + strand at 450.374 kb on + strand at 450.374 kb on + strand at 450.375 kb on - strand at 450.375 kb on - strand at 450.375 kb on - strand at 450.375 kb on - strand at 450.375 kb on - strand at 450.375 kb on - strand at 450.375 kb on - strand at 450.386 kb on + strand at 450.386 kb on + strand at 450.387 kb on - strand at 450.387 kb on - strand at 450.387 kb on - strand at 450.387 kb on - strand at 450.449 kb on + strand at 450.449 kb on + strand at 450.449 kb on + strand at 450.558 kb on + strand at 450.558 kb on + strand at 450.656 kb on - strand, within AO353_02105 at 450.796 kb on + strand, within AO353_02105 at 451.237 kb on + strand at 451.238 kb on - strand at 451.297 kb on + strand at 451.297 kb on + strand at 451.298 kb on - strand at 451.298 kb on - strand at 451.298 kb on - strand at 451.332 kb on + strand at 451.333 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.01 mg/ml remove 448,795 + AO353_02090 0.89 +0.2 448,795 + AO353_02090 0.89 -0.4 448,795 + AO353_02090 0.89 +1.2 448,795 + AO353_02090 0.89 +0.9 448,795 + AO353_02090 0.89 +1.3 448,796 - AO353_02090 0.89 -1.8 448,796 - AO353_02090 0.89 -0.2 448,796 - AO353_02090 0.89 +1.1 448,796 - AO353_02090 0.89 -2.0 448,799 + AO353_02090 0.89 +0.0 448,799 + AO353_02090 0.89 +0.3 448,799 + AO353_02090 0.89 +0.4 448,800 - AO353_02090 0.89 -0.3 448,800 - AO353_02090 0.89 +0.1 448,800 - AO353_02090 0.89 +1.0 448,893 + +1.0 448,893 + -0.5 448,893 + +0.3 448,894 - -0.5 448,894 - -0.2 448,894 - -0.3 448,894 - -0.1 448,894 - +0.6 448,894 - +0.5 448,894 - -0.4 448,894 - +0.8 448,943 + +0.2 448,944 - -0.2 448,944 - -0.8 448,996 + +0.6 448,996 + +0.9 448,996 + -0.1 448,996 + -0.3 448,996 + -0.4 448,997 - -2.2 448,997 - -1.8 449,004 + -0.3 449,705 + -0.4 449,705 + -1.7 449,705 + -0.5 449,706 - -0.1 450,160 + AO353_02100 0.67 +0.4 450,160 + AO353_02100 0.67 -1.3 450,161 - AO353_02100 0.67 -1.3 450,161 - AO353_02100 0.67 -0.1 450,279 + AO353_02100 0.84 -0.9 450,279 + AO353_02100 0.84 -1.6 450,279 + AO353_02100 0.84 -0.7 450,279 + AO353_02100 0.84 -0.4 450,280 - AO353_02100 0.85 -0.2 450,374 + +0.1 450,374 + +0.5 450,374 + +0.8 450,375 - -1.4 450,375 - +0.7 450,375 - +0.2 450,375 - -0.7 450,375 - +0.3 450,375 - -0.3 450,375 - -1.0 450,386 + -0.4 450,386 + +0.4 450,387 - -0.4 450,387 - +0.5 450,387 - +0.3 450,387 - +0.4 450,449 + -0.1 450,449 + +0.7 450,449 + -0.5 450,558 + +0.8 450,558 + -0.3 450,656 - AO353_02105 0.13 +0.1 450,796 + AO353_02105 0.32 +0.5 451,237 + +0.2 451,238 - -0.8 451,297 + +0.0 451,297 + +1.6 451,298 - -0.6 451,298 - -1.0 451,298 - +0.4 451,332 + +1.6 451,333 - -0.1
Or see this region's nucleotide sequence