Experiment: N-Acetyl-D-glucosamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS19205 and ABZR86_RS19210 are separated by 99 nucleotides ABZR86_RS19210 and ABZR86_RS19215 are separated by 190 nucleotides ABZR86_RS19215 and ABZR86_RS19220 are separated by 60 nucleotides
ABZR86_RS19205: ABZR86_RS19205 - low-specificity L-threonine aldolase, at 295,590 to 296,612
_RS19205
ABZR86_RS19210: ABZR86_RS19210 - polyhydroxyalkanoate depolymerase, at 296,712 to 297,965
_RS19210
ABZR86_RS19215: ABZR86_RS19215 - class I SAM-dependent methyltransferase, at 298,156 to 298,902
_RS19215
ABZR86_RS19220: ABZR86_RS19220 - RDD family protein, at 298,963 to 299,469
_RS19220
Position (kb) 296
297
298 Strain fitness (log2 ratio) -1
0
1
2 at 295.821 kb on + strand, within ABZR86_RS19205 at 295.821 kb on + strand, within ABZR86_RS19205 at 295.821 kb on + strand, within ABZR86_RS19205 at 295.844 kb on + strand, within ABZR86_RS19205 at 295.844 kb on + strand, within ABZR86_RS19205 at 295.844 kb on + strand, within ABZR86_RS19205 at 295.844 kb on + strand, within ABZR86_RS19205 at 295.845 kb on - strand, within ABZR86_RS19205 at 295.845 kb on - strand, within ABZR86_RS19205 at 295.848 kb on + strand, within ABZR86_RS19205 at 295.849 kb on - strand, within ABZR86_RS19205 at 295.849 kb on - strand, within ABZR86_RS19205 at 295.849 kb on - strand, within ABZR86_RS19205 at 296.037 kb on + strand, within ABZR86_RS19205 at 296.512 kb on - strand at 296.619 kb on + strand at 296.620 kb on - strand at 296.620 kb on - strand at 296.701 kb on + strand at 296.701 kb on + strand at 296.701 kb on + strand at 296.701 kb on + strand at 296.701 kb on + strand at 296.701 kb on + strand at 296.702 kb on - strand at 296.702 kb on - strand at 296.702 kb on - strand at 296.702 kb on - strand at 296.761 kb on + strand at 296.762 kb on - strand at 297.031 kb on + strand, within ABZR86_RS19210 at 297.034 kb on + strand, within ABZR86_RS19210 at 297.034 kb on + strand, within ABZR86_RS19210 at 297.035 kb on - strand, within ABZR86_RS19210 at 297.064 kb on + strand, within ABZR86_RS19210 at 297.064 kb on + strand, within ABZR86_RS19210 at 297.064 kb on + strand, within ABZR86_RS19210 at 297.064 kb on + strand, within ABZR86_RS19210 at 297.065 kb on - strand, within ABZR86_RS19210 at 297.065 kb on - strand, within ABZR86_RS19210 at 297.065 kb on - strand, within ABZR86_RS19210 at 297.065 kb on - strand, within ABZR86_RS19210 at 297.073 kb on + strand, within ABZR86_RS19210 at 297.074 kb on - strand, within ABZR86_RS19210 at 297.128 kb on - strand, within ABZR86_RS19210 at 297.476 kb on - strand, within ABZR86_RS19210 at 297.476 kb on - strand, within ABZR86_RS19210 at 297.484 kb on + strand, within ABZR86_RS19210 at 297.484 kb on + strand, within ABZR86_RS19210 at 297.484 kb on + strand, within ABZR86_RS19210 at 297.485 kb on - strand, within ABZR86_RS19210 at 297.550 kb on + strand, within ABZR86_RS19210 at 297.550 kb on + strand, within ABZR86_RS19210 at 297.550 kb on + strand, within ABZR86_RS19210 at 297.551 kb on - strand, within ABZR86_RS19210 at 297.551 kb on - strand, within ABZR86_RS19210 at 297.551 kb on - strand, within ABZR86_RS19210 at 297.551 kb on - strand, within ABZR86_RS19210 at 297.551 kb on - strand, within ABZR86_RS19210 at 297.551 kb on - strand, within ABZR86_RS19210 at 297.551 kb on - strand, within ABZR86_RS19210 at 297.682 kb on + strand, within ABZR86_RS19210 at 297.682 kb on + strand, within ABZR86_RS19210 at 297.683 kb on - strand, within ABZR86_RS19210 at 297.796 kb on + strand, within ABZR86_RS19210 at 297.958 kb on + strand at 297.958 kb on + strand at 297.959 kb on - strand at 298.001 kb on + strand at 298.001 kb on + strand at 298.053 kb on + strand at 298.054 kb on - strand at 298.070 kb on + strand at 298.116 kb on + strand at 298.116 kb on + strand at 298.157 kb on + strand at 298.158 kb on - strand at 298.158 kb on - strand at 298.271 kb on + strand, within ABZR86_RS19215 at 298.271 kb on + strand, within ABZR86_RS19215 at 298.271 kb on + strand, within ABZR86_RS19215 at 298.272 kb on - strand, within ABZR86_RS19215 at 298.272 kb on - strand, within ABZR86_RS19215 at 298.272 kb on - strand, within ABZR86_RS19215 at 298.307 kb on + strand, within ABZR86_RS19215 at 298.308 kb on - strand, within ABZR86_RS19215 at 298.308 kb on - strand, within ABZR86_RS19215 at 298.308 kb on - strand, within ABZR86_RS19215 at 298.355 kb on + strand, within ABZR86_RS19215 at 298.356 kb on - strand, within ABZR86_RS19215 at 298.356 kb on - strand, within ABZR86_RS19215 at 298.604 kb on + strand, within ABZR86_RS19215 at 298.604 kb on + strand, within ABZR86_RS19215 at 298.605 kb on - strand, within ABZR86_RS19215 at 298.785 kb on + strand, within ABZR86_RS19215 at 298.785 kb on + strand, within ABZR86_RS19215 at 298.836 kb on - strand at 298.836 kb on - strand at 298.836 kb on - strand at 298.908 kb on + strand at 298.909 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction N-Acetyl-D-glucosamine (N) remove 295,821 + ABZR86_RS19205 0.23 -0.4 295,821 + ABZR86_RS19205 0.23 -0.1 295,821 + ABZR86_RS19205 0.23 +0.3 295,844 + ABZR86_RS19205 0.25 +0.1 295,844 + ABZR86_RS19205 0.25 +0.1 295,844 + ABZR86_RS19205 0.25 +0.7 295,844 + ABZR86_RS19205 0.25 -0.2 295,845 - ABZR86_RS19205 0.25 +0.6 295,845 - ABZR86_RS19205 0.25 +0.1 295,848 + ABZR86_RS19205 0.25 +0.1 295,849 - ABZR86_RS19205 0.25 +0.2 295,849 - ABZR86_RS19205 0.25 -0.1 295,849 - ABZR86_RS19205 0.25 +0.5 296,037 + ABZR86_RS19205 0.44 +0.1 296,512 - +0.3 296,619 + +2.0 296,620 - -1.4 296,620 - +0.6 296,701 + +0.2 296,701 + -0.2 296,701 + +0.3 296,701 + -0.5 296,701 + -0.9 296,701 + +0.5 296,702 - -0.3 296,702 - -0.1 296,702 - +0.1 296,702 - +0.6 296,761 + +0.0 296,762 - +0.2 297,031 + ABZR86_RS19210 0.25 +0.2 297,034 + ABZR86_RS19210 0.26 +0.3 297,034 + ABZR86_RS19210 0.26 +0.3 297,035 - ABZR86_RS19210 0.26 +0.1 297,064 + ABZR86_RS19210 0.28 +0.1 297,064 + ABZR86_RS19210 0.28 +1.2 297,064 + ABZR86_RS19210 0.28 +0.7 297,064 + ABZR86_RS19210 0.28 +0.1 297,065 - ABZR86_RS19210 0.28 -0.9 297,065 - ABZR86_RS19210 0.28 +0.4 297,065 - ABZR86_RS19210 0.28 +0.6 297,065 - ABZR86_RS19210 0.28 +0.3 297,073 + ABZR86_RS19210 0.29 -0.5 297,074 - ABZR86_RS19210 0.29 +0.7 297,128 - ABZR86_RS19210 0.33 +0.5 297,476 - ABZR86_RS19210 0.61 +0.2 297,476 - ABZR86_RS19210 0.61 +0.6 297,484 + ABZR86_RS19210 0.62 +0.3 297,484 + ABZR86_RS19210 0.62 +0.5 297,484 + ABZR86_RS19210 0.62 +0.4 297,485 - ABZR86_RS19210 0.62 -0.6 297,550 + ABZR86_RS19210 0.67 +0.1 297,550 + ABZR86_RS19210 0.67 -1.5 297,550 + ABZR86_RS19210 0.67 -0.1 297,551 - ABZR86_RS19210 0.67 +0.6 297,551 - ABZR86_RS19210 0.67 +0.4 297,551 - ABZR86_RS19210 0.67 +1.0 297,551 - ABZR86_RS19210 0.67 +0.2 297,551 - ABZR86_RS19210 0.67 -0.4 297,551 - ABZR86_RS19210 0.67 +0.1 297,551 - ABZR86_RS19210 0.67 +0.4 297,682 + ABZR86_RS19210 0.77 -0.0 297,682 + ABZR86_RS19210 0.77 -0.2 297,683 - ABZR86_RS19210 0.77 -0.1 297,796 + ABZR86_RS19210 0.86 +0.3 297,958 + +1.6 297,958 + -0.2 297,959 - +0.1 298,001 + -0.0 298,001 + -0.2 298,053 + +0.2 298,054 - +0.3 298,070 + +0.2 298,116 + +0.4 298,116 + -0.8 298,157 + +0.2 298,158 - +0.1 298,158 - +0.3 298,271 + ABZR86_RS19215 0.15 -0.3 298,271 + ABZR86_RS19215 0.15 +0.3 298,271 + ABZR86_RS19215 0.15 -0.9 298,272 - ABZR86_RS19215 0.16 -0.3 298,272 - ABZR86_RS19215 0.16 -0.0 298,272 - ABZR86_RS19215 0.16 -0.3 298,307 + ABZR86_RS19215 0.20 +0.6 298,308 - ABZR86_RS19215 0.20 -0.5 298,308 - ABZR86_RS19215 0.20 -0.2 298,308 - ABZR86_RS19215 0.20 -0.3 298,355 + ABZR86_RS19215 0.27 -0.2 298,356 - ABZR86_RS19215 0.27 +0.7 298,356 - ABZR86_RS19215 0.27 +0.4 298,604 + ABZR86_RS19215 0.60 +0.3 298,604 + ABZR86_RS19215 0.60 -0.1 298,605 - ABZR86_RS19215 0.60 +0.3 298,785 + ABZR86_RS19215 0.84 -0.2 298,785 + ABZR86_RS19215 0.84 +0.1 298,836 - +0.2 298,836 - -0.7 298,836 - +0.4 298,908 + +0.4 298,909 - +0.2
Or see this region's nucleotide sequence