Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS17525

Experiment: N-Acetyl-D-glucosamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS17520 and ABZR86_RS17525 are separated by 220 nucleotidesABZR86_RS17525 and ABZR86_RS17530 are separated by 253 nucleotides ABZR86_RS17520: ABZR86_RS17520 - M1 family metallopeptidase, at 3,956,610 to 3,958,367 _RS17520 ABZR86_RS17525: ABZR86_RS17525 - DUF559 domain-containing protein, at 3,958,588 to 3,958,983 _RS17525 ABZR86_RS17530: ABZR86_RS17530 - M17 family metallopeptidase, at 3,959,237 to 3,960,610 _RS17530 Position (kb) 3958 3959Strain fitness (log2 ratio) -2 -1 0 1at 3957.591 kb on - strand, within ABZR86_RS17520at 3957.591 kb on - strand, within ABZR86_RS17520at 3957.591 kb on - strand, within ABZR86_RS17520at 3957.613 kb on + strand, within ABZR86_RS17520at 3957.613 kb on + strand, within ABZR86_RS17520at 3957.614 kb on - strand, within ABZR86_RS17520at 3957.614 kb on - strand, within ABZR86_RS17520at 3957.614 kb on - strand, within ABZR86_RS17520at 3957.661 kb on + strand, within ABZR86_RS17520at 3957.661 kb on + strand, within ABZR86_RS17520at 3957.662 kb on - strand, within ABZR86_RS17520at 3957.662 kb on - strand, within ABZR86_RS17520at 3957.691 kb on + strand, within ABZR86_RS17520at 3957.691 kb on + strand, within ABZR86_RS17520at 3957.691 kb on + strand, within ABZR86_RS17520at 3957.691 kb on + strand, within ABZR86_RS17520at 3957.691 kb on + strand, within ABZR86_RS17520at 3957.691 kb on + strand, within ABZR86_RS17520at 3957.691 kb on + strand, within ABZR86_RS17520at 3957.691 kb on + strand, within ABZR86_RS17520at 3957.691 kb on + strand, within ABZR86_RS17520at 3957.692 kb on - strand, within ABZR86_RS17520at 3957.692 kb on - strand, within ABZR86_RS17520at 3957.692 kb on - strand, within ABZR86_RS17520at 3957.692 kb on - strand, within ABZR86_RS17520at 3957.692 kb on - strand, within ABZR86_RS17520at 3957.692 kb on - strand, within ABZR86_RS17520at 3957.692 kb on - strand, within ABZR86_RS17520at 3957.772 kb on + strand, within ABZR86_RS17520at 3957.772 kb on + strand, within ABZR86_RS17520at 3957.772 kb on + strand, within ABZR86_RS17520at 3957.772 kb on + strand, within ABZR86_RS17520at 3957.772 kb on + strand, within ABZR86_RS17520at 3957.772 kb on + strand, within ABZR86_RS17520at 3957.772 kb on + strand, within ABZR86_RS17520at 3957.772 kb on + strand, within ABZR86_RS17520at 3957.772 kb on + strand, within ABZR86_RS17520at 3957.772 kb on + strand, within ABZR86_RS17520at 3957.773 kb on - strand, within ABZR86_RS17520at 3957.773 kb on - strand, within ABZR86_RS17520at 3957.773 kb on - strand, within ABZR86_RS17520at 3957.773 kb on - strand, within ABZR86_RS17520at 3957.773 kb on - strand, within ABZR86_RS17520at 3957.773 kb on - strand, within ABZR86_RS17520at 3957.846 kb on + strand, within ABZR86_RS17520at 3957.847 kb on - strand, within ABZR86_RS17520at 3958.393 kb on + strandat 3958.393 kb on + strandat 3958.393 kb on + strandat 3958.393 kb on + strandat 3958.415 kb on + strandat 3958.416 kb on - strandat 3958.416 kb on - strandat 3958.530 kb on + strandat 3958.531 kb on - strandat 3958.555 kb on + strandat 3958.555 kb on + strandat 3958.720 kb on + strand, within ABZR86_RS17525at 3958.721 kb on - strand, within ABZR86_RS17525at 3958.798 kb on + strand, within ABZR86_RS17525at 3958.798 kb on + strand, within ABZR86_RS17525at 3958.799 kb on - strand, within ABZR86_RS17525at 3959.104 kb on + strandat 3959.104 kb on + strandat 3959.105 kb on - strandat 3959.105 kb on - strandat 3959.105 kb on - strandat 3959.144 kb on + strandat 3959.144 kb on + strandat 3959.145 kb on - strandat 3959.145 kb on - strandat 3959.145 kb on - strandat 3959.198 kb on + strandat 3959.198 kb on + strandat 3959.198 kb on + strandat 3959.198 kb on + strandat 3959.198 kb on + strandat 3959.199 kb on - strandat 3959.199 kb on - strandat 3959.199 kb on - strandat 3959.199 kb on - strandat 3959.199 kb on - strandat 3959.199 kb on - strandat 3959.199 kb on - strandat 3959.231 kb on + strandat 3959.231 kb on + strandat 3959.231 kb on + strandat 3959.232 kb on - strandat 3959.232 kb on - strandat 3959.232 kb on - strandat 3959.334 kb on + strandat 3959.334 kb on + strandat 3959.334 kb on + strandat 3959.334 kb on + strandat 3959.335 kb on - strandat 3959.335 kb on - strandat 3959.338 kb on + strandat 3959.338 kb on + strandat 3959.385 kb on + strand, within ABZR86_RS17530at 3959.448 kb on + strand, within ABZR86_RS17530at 3959.448 kb on + strand, within ABZR86_RS17530at 3959.448 kb on + strand, within ABZR86_RS17530at 3959.448 kb on + strand, within ABZR86_RS17530at 3959.448 kb on + strand, within ABZR86_RS17530at 3959.449 kb on - strand, within ABZR86_RS17530at 3959.449 kb on - strand, within ABZR86_RS17530at 3959.652 kb on + strand, within ABZR86_RS17530

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Per-strain Table

Position Strand Gene LocusTag Fraction N-Acetyl-D-glucosamine (N)
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3,957,591 - ABZR86_RS17520 0.56 -0.9
3,957,591 - ABZR86_RS17520 0.56 +0.0
3,957,591 - ABZR86_RS17520 0.56 -0.5
3,957,613 + ABZR86_RS17520 0.57 -0.4
3,957,613 + ABZR86_RS17520 0.57 -0.3
3,957,614 - ABZR86_RS17520 0.57 +1.3
3,957,614 - ABZR86_RS17520 0.57 -0.7
3,957,614 - ABZR86_RS17520 0.57 +0.3
3,957,661 + ABZR86_RS17520 0.60 -1.6
3,957,661 + ABZR86_RS17520 0.60 +0.9
3,957,662 - ABZR86_RS17520 0.60 +0.3
3,957,662 - ABZR86_RS17520 0.60 -0.4
3,957,691 + ABZR86_RS17520 0.61 -0.5
3,957,691 + ABZR86_RS17520 0.61 -0.8
3,957,691 + ABZR86_RS17520 0.61 -0.5
3,957,691 + ABZR86_RS17520 0.61 -0.4
3,957,691 + ABZR86_RS17520 0.61 -0.1
3,957,691 + ABZR86_RS17520 0.61 -0.2
3,957,691 + ABZR86_RS17520 0.61 -0.2
3,957,691 + ABZR86_RS17520 0.61 +0.1
3,957,691 + ABZR86_RS17520 0.61 -0.1
3,957,692 - ABZR86_RS17520 0.62 +0.0
3,957,692 - ABZR86_RS17520 0.62 -0.2
3,957,692 - ABZR86_RS17520 0.62 +0.0
3,957,692 - ABZR86_RS17520 0.62 +0.1
3,957,692 - ABZR86_RS17520 0.62 -0.3
3,957,692 - ABZR86_RS17520 0.62 +0.1
3,957,692 - ABZR86_RS17520 0.62 +0.2
3,957,772 + ABZR86_RS17520 0.66 +0.3
3,957,772 + ABZR86_RS17520 0.66 -0.3
3,957,772 + ABZR86_RS17520 0.66 -0.6
3,957,772 + ABZR86_RS17520 0.66 +0.4
3,957,772 + ABZR86_RS17520 0.66 -0.2
3,957,772 + ABZR86_RS17520 0.66 -0.1
3,957,772 + ABZR86_RS17520 0.66 +1.0
3,957,772 + ABZR86_RS17520 0.66 -0.1
3,957,772 + ABZR86_RS17520 0.66 -0.3
3,957,772 + ABZR86_RS17520 0.66 -1.0
3,957,773 - ABZR86_RS17520 0.66 +0.3
3,957,773 - ABZR86_RS17520 0.66 -1.3
3,957,773 - ABZR86_RS17520 0.66 -0.6
3,957,773 - ABZR86_RS17520 0.66 -0.1
3,957,773 - ABZR86_RS17520 0.66 -0.3
3,957,773 - ABZR86_RS17520 0.66 -0.5
3,957,846 + ABZR86_RS17520 0.70 +0.2
3,957,847 - ABZR86_RS17520 0.70 -1.4
3,958,393 + +0.1
3,958,393 + +1.6
3,958,393 + -0.6
3,958,393 + -0.1
3,958,415 + +0.5
3,958,416 - +0.5
3,958,416 - -0.6
3,958,530 + -0.6
3,958,531 - +0.1
3,958,555 + -0.1
3,958,555 + -0.9
3,958,720 + ABZR86_RS17525 0.33 -0.1
3,958,721 - ABZR86_RS17525 0.34 +0.0
3,958,798 + ABZR86_RS17525 0.53 +0.2
3,958,798 + ABZR86_RS17525 0.53 -2.1
3,958,799 - ABZR86_RS17525 0.53 -0.3
3,959,104 + -0.1
3,959,104 + -0.3
3,959,105 - +0.2
3,959,105 - -0.1
3,959,105 - +0.2
3,959,144 + -0.6
3,959,144 + -0.3
3,959,145 - -0.6
3,959,145 - +0.1
3,959,145 - +0.5
3,959,198 + -0.2
3,959,198 + -0.3
3,959,198 + -0.1
3,959,198 + -0.6
3,959,198 + -0.0
3,959,199 - +0.5
3,959,199 - -0.2
3,959,199 - -0.1
3,959,199 - -0.1
3,959,199 - -0.2
3,959,199 - +0.1
3,959,199 - +0.1
3,959,231 + -0.0
3,959,231 + -0.3
3,959,231 + -0.2
3,959,232 - +0.6
3,959,232 - -0.7
3,959,232 - +0.8
3,959,334 + +0.4
3,959,334 + +0.6
3,959,334 + +0.7
3,959,334 + -0.8
3,959,335 - +0.9
3,959,335 - +0.6
3,959,338 + +0.2
3,959,338 + +0.2
3,959,385 + ABZR86_RS17530 0.11 +0.6
3,959,448 + ABZR86_RS17530 0.15 +0.8
3,959,448 + ABZR86_RS17530 0.15 +0.6
3,959,448 + ABZR86_RS17530 0.15 +0.3
3,959,448 + ABZR86_RS17530 0.15 +1.0
3,959,448 + ABZR86_RS17530 0.15 +0.4
3,959,449 - ABZR86_RS17530 0.15 +0.0
3,959,449 - ABZR86_RS17530 0.15 +1.0
3,959,652 + ABZR86_RS17530 0.30 +0.3

Or see this region's nucleotide sequence