Experiment: N-Acetyl-D-glucosamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS17520 and ABZR86_RS17525 are separated by 220 nucleotides ABZR86_RS17525 and ABZR86_RS17530 are separated by 253 nucleotides
ABZR86_RS17520: ABZR86_RS17520 - M1 family metallopeptidase, at 3,956,610 to 3,958,367
_RS17520
ABZR86_RS17525: ABZR86_RS17525 - DUF559 domain-containing protein, at 3,958,588 to 3,958,983
_RS17525
ABZR86_RS17530: ABZR86_RS17530 - M17 family metallopeptidase, at 3,959,237 to 3,960,610
_RS17530
Position (kb)
3958
3959 Strain fitness (log2 ratio)
-2
-1
0
1 at 3957.591 kb on - strand, within ABZR86_RS17520 at 3957.591 kb on - strand, within ABZR86_RS17520 at 3957.591 kb on - strand, within ABZR86_RS17520 at 3957.613 kb on + strand, within ABZR86_RS17520 at 3957.613 kb on + strand, within ABZR86_RS17520 at 3957.614 kb on - strand, within ABZR86_RS17520 at 3957.614 kb on - strand, within ABZR86_RS17520 at 3957.614 kb on - strand, within ABZR86_RS17520 at 3957.661 kb on + strand, within ABZR86_RS17520 at 3957.661 kb on + strand, within ABZR86_RS17520 at 3957.662 kb on - strand, within ABZR86_RS17520 at 3957.662 kb on - strand, within ABZR86_RS17520 at 3957.691 kb on + strand, within ABZR86_RS17520 at 3957.691 kb on + strand, within ABZR86_RS17520 at 3957.691 kb on + strand, within ABZR86_RS17520 at 3957.691 kb on + strand, within ABZR86_RS17520 at 3957.691 kb on + strand, within ABZR86_RS17520 at 3957.691 kb on + strand, within ABZR86_RS17520 at 3957.691 kb on + strand, within ABZR86_RS17520 at 3957.691 kb on + strand, within ABZR86_RS17520 at 3957.691 kb on + strand, within ABZR86_RS17520 at 3957.692 kb on - strand, within ABZR86_RS17520 at 3957.692 kb on - strand, within ABZR86_RS17520 at 3957.692 kb on - strand, within ABZR86_RS17520 at 3957.692 kb on - strand, within ABZR86_RS17520 at 3957.692 kb on - strand, within ABZR86_RS17520 at 3957.692 kb on - strand, within ABZR86_RS17520 at 3957.692 kb on - strand, within ABZR86_RS17520 at 3957.772 kb on + strand, within ABZR86_RS17520 at 3957.772 kb on + strand, within ABZR86_RS17520 at 3957.772 kb on + strand, within ABZR86_RS17520 at 3957.772 kb on + strand, within ABZR86_RS17520 at 3957.772 kb on + strand, within ABZR86_RS17520 at 3957.772 kb on + strand, within ABZR86_RS17520 at 3957.772 kb on + strand, within ABZR86_RS17520 at 3957.772 kb on + strand, within ABZR86_RS17520 at 3957.772 kb on + strand, within ABZR86_RS17520 at 3957.772 kb on + strand, within ABZR86_RS17520 at 3957.773 kb on - strand, within ABZR86_RS17520 at 3957.773 kb on - strand, within ABZR86_RS17520 at 3957.773 kb on - strand, within ABZR86_RS17520 at 3957.773 kb on - strand, within ABZR86_RS17520 at 3957.773 kb on - strand, within ABZR86_RS17520 at 3957.773 kb on - strand, within ABZR86_RS17520 at 3957.846 kb on + strand, within ABZR86_RS17520 at 3957.847 kb on - strand, within ABZR86_RS17520 at 3958.393 kb on + strand at 3958.393 kb on + strand at 3958.393 kb on + strand at 3958.393 kb on + strand at 3958.415 kb on + strand at 3958.416 kb on - strand at 3958.416 kb on - strand at 3958.530 kb on + strand at 3958.531 kb on - strand at 3958.555 kb on + strand at 3958.555 kb on + strand at 3958.720 kb on + strand, within ABZR86_RS17525 at 3958.721 kb on - strand, within ABZR86_RS17525 at 3958.798 kb on + strand, within ABZR86_RS17525 at 3958.798 kb on + strand, within ABZR86_RS17525 at 3958.799 kb on - strand, within ABZR86_RS17525 at 3959.104 kb on + strand at 3959.104 kb on + strand at 3959.105 kb on - strand at 3959.105 kb on - strand at 3959.105 kb on - strand at 3959.144 kb on + strand at 3959.144 kb on + strand at 3959.145 kb on - strand at 3959.145 kb on - strand at 3959.145 kb on - strand at 3959.198 kb on + strand at 3959.198 kb on + strand at 3959.198 kb on + strand at 3959.198 kb on + strand at 3959.198 kb on + strand at 3959.199 kb on - strand at 3959.199 kb on - strand at 3959.199 kb on - strand at 3959.199 kb on - strand at 3959.199 kb on - strand at 3959.199 kb on - strand at 3959.199 kb on - strand at 3959.231 kb on + strand at 3959.231 kb on + strand at 3959.231 kb on + strand at 3959.232 kb on - strand at 3959.232 kb on - strand at 3959.232 kb on - strand at 3959.334 kb on + strand at 3959.334 kb on + strand at 3959.334 kb on + strand at 3959.334 kb on + strand at 3959.335 kb on - strand at 3959.335 kb on - strand at 3959.338 kb on + strand at 3959.338 kb on + strand at 3959.385 kb on + strand, within ABZR86_RS17530 at 3959.448 kb on + strand, within ABZR86_RS17530 at 3959.448 kb on + strand, within ABZR86_RS17530 at 3959.448 kb on + strand, within ABZR86_RS17530 at 3959.448 kb on + strand, within ABZR86_RS17530 at 3959.448 kb on + strand, within ABZR86_RS17530 at 3959.449 kb on - strand, within ABZR86_RS17530 at 3959.449 kb on - strand, within ABZR86_RS17530 at 3959.652 kb on + strand, within ABZR86_RS17530
Per-strain Table
Position Strand Gene LocusTag Fraction N-Acetyl-D-glucosamine (N) remove 3,957,591 - ABZR86_RS17520 0.56 -0.9 3,957,591 - ABZR86_RS17520 0.56 +0.0 3,957,591 - ABZR86_RS17520 0.56 -0.5 3,957,613 + ABZR86_RS17520 0.57 -0.4 3,957,613 + ABZR86_RS17520 0.57 -0.3 3,957,614 - ABZR86_RS17520 0.57 +1.3 3,957,614 - ABZR86_RS17520 0.57 -0.7 3,957,614 - ABZR86_RS17520 0.57 +0.3 3,957,661 + ABZR86_RS17520 0.60 -1.6 3,957,661 + ABZR86_RS17520 0.60 +0.9 3,957,662 - ABZR86_RS17520 0.60 +0.3 3,957,662 - ABZR86_RS17520 0.60 -0.4 3,957,691 + ABZR86_RS17520 0.61 -0.5 3,957,691 + ABZR86_RS17520 0.61 -0.8 3,957,691 + ABZR86_RS17520 0.61 -0.5 3,957,691 + ABZR86_RS17520 0.61 -0.4 3,957,691 + ABZR86_RS17520 0.61 -0.1 3,957,691 + ABZR86_RS17520 0.61 -0.2 3,957,691 + ABZR86_RS17520 0.61 -0.2 3,957,691 + ABZR86_RS17520 0.61 +0.1 3,957,691 + ABZR86_RS17520 0.61 -0.1 3,957,692 - ABZR86_RS17520 0.62 +0.0 3,957,692 - ABZR86_RS17520 0.62 -0.2 3,957,692 - ABZR86_RS17520 0.62 +0.0 3,957,692 - ABZR86_RS17520 0.62 +0.1 3,957,692 - ABZR86_RS17520 0.62 -0.3 3,957,692 - ABZR86_RS17520 0.62 +0.1 3,957,692 - ABZR86_RS17520 0.62 +0.2 3,957,772 + ABZR86_RS17520 0.66 +0.3 3,957,772 + ABZR86_RS17520 0.66 -0.3 3,957,772 + ABZR86_RS17520 0.66 -0.6 3,957,772 + ABZR86_RS17520 0.66 +0.4 3,957,772 + ABZR86_RS17520 0.66 -0.2 3,957,772 + ABZR86_RS17520 0.66 -0.1 3,957,772 + ABZR86_RS17520 0.66 +1.0 3,957,772 + ABZR86_RS17520 0.66 -0.1 3,957,772 + ABZR86_RS17520 0.66 -0.3 3,957,772 + ABZR86_RS17520 0.66 -1.0 3,957,773 - ABZR86_RS17520 0.66 +0.3 3,957,773 - ABZR86_RS17520 0.66 -1.3 3,957,773 - ABZR86_RS17520 0.66 -0.6 3,957,773 - ABZR86_RS17520 0.66 -0.1 3,957,773 - ABZR86_RS17520 0.66 -0.3 3,957,773 - ABZR86_RS17520 0.66 -0.5 3,957,846 + ABZR86_RS17520 0.70 +0.2 3,957,847 - ABZR86_RS17520 0.70 -1.4 3,958,393 + +0.1 3,958,393 + +1.6 3,958,393 + -0.6 3,958,393 + -0.1 3,958,415 + +0.5 3,958,416 - +0.5 3,958,416 - -0.6 3,958,530 + -0.6 3,958,531 - +0.1 3,958,555 + -0.1 3,958,555 + -0.9 3,958,720 + ABZR86_RS17525 0.33 -0.1 3,958,721 - ABZR86_RS17525 0.34 +0.0 3,958,798 + ABZR86_RS17525 0.53 +0.2 3,958,798 + ABZR86_RS17525 0.53 -2.1 3,958,799 - ABZR86_RS17525 0.53 -0.3 3,959,104 + -0.1 3,959,104 + -0.3 3,959,105 - +0.2 3,959,105 - -0.1 3,959,105 - +0.2 3,959,144 + -0.6 3,959,144 + -0.3 3,959,145 - -0.6 3,959,145 - +0.1 3,959,145 - +0.5 3,959,198 + -0.2 3,959,198 + -0.3 3,959,198 + -0.1 3,959,198 + -0.6 3,959,198 + -0.0 3,959,199 - +0.5 3,959,199 - -0.2 3,959,199 - -0.1 3,959,199 - -0.1 3,959,199 - -0.2 3,959,199 - +0.1 3,959,199 - +0.1 3,959,231 + -0.0 3,959,231 + -0.3 3,959,231 + -0.2 3,959,232 - +0.6 3,959,232 - -0.7 3,959,232 - +0.8 3,959,334 + +0.4 3,959,334 + +0.6 3,959,334 + +0.7 3,959,334 + -0.8 3,959,335 - +0.9 3,959,335 - +0.6 3,959,338 + +0.2 3,959,338 + +0.2 3,959,385 + ABZR86_RS17530 0.11 +0.6 3,959,448 + ABZR86_RS17530 0.15 +0.8 3,959,448 + ABZR86_RS17530 0.15 +0.6 3,959,448 + ABZR86_RS17530 0.15 +0.3 3,959,448 + ABZR86_RS17530 0.15 +1.0 3,959,448 + ABZR86_RS17530 0.15 +0.4 3,959,449 - ABZR86_RS17530 0.15 +0.0 3,959,449 - ABZR86_RS17530 0.15 +1.0 3,959,652 + ABZR86_RS17530 0.30 +0.3
Or see this region's nucleotide sequence