Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS17515

Experiment: N-Acetyl-D-glucosamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS17510 and ABZR86_RS17515 are separated by 214 nucleotidesABZR86_RS17515 and ABZR86_RS17520 are separated by 109 nucleotides ABZR86_RS17510: ABZR86_RS17510 - carboxy terminal-processing peptidase, at 3,953,425 to 3,955,677 _RS17510 ABZR86_RS17515: ABZR86_RS17515 - DUF4126 domain-containing protein, at 3,955,892 to 3,956,500 _RS17515 ABZR86_RS17520: ABZR86_RS17520 - M1 family metallopeptidase, at 3,956,610 to 3,958,367 _RS17520 Position (kb) 3955 3956 3957Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3954.895 kb on + strand, within ABZR86_RS17510at 3954.895 kb on + strand, within ABZR86_RS17510at 3954.896 kb on - strand, within ABZR86_RS17510at 3954.896 kb on - strand, within ABZR86_RS17510at 3954.896 kb on - strand, within ABZR86_RS17510at 3954.896 kb on - strand, within ABZR86_RS17510at 3955.129 kb on + strand, within ABZR86_RS17510at 3955.130 kb on - strand, within ABZR86_RS17510at 3955.130 kb on - strand, within ABZR86_RS17510at 3955.130 kb on - strand, within ABZR86_RS17510at 3955.174 kb on + strand, within ABZR86_RS17510at 3955.175 kb on - strand, within ABZR86_RS17510at 3955.175 kb on - strand, within ABZR86_RS17510at 3955.175 kb on - strand, within ABZR86_RS17510at 3955.175 kb on - strand, within ABZR86_RS17510at 3955.285 kb on + strand, within ABZR86_RS17510at 3955.688 kb on + strandat 3955.689 kb on - strandat 3955.689 kb on - strandat 3955.689 kb on - strandat 3955.689 kb on - strandat 3955.689 kb on - strandat 3955.689 kb on - strandat 3955.698 kb on + strandat 3955.699 kb on - strandat 3955.699 kb on - strandat 3955.699 kb on - strandat 3955.879 kb on + strandat 3955.879 kb on + strandat 3955.879 kb on + strandat 3955.879 kb on + strandat 3955.879 kb on + strandat 3955.880 kb on - strandat 3955.948 kb on - strandat 3955.948 kb on - strandat 3955.955 kb on + strand, within ABZR86_RS17515at 3955.955 kb on + strand, within ABZR86_RS17515at 3955.956 kb on - strand, within ABZR86_RS17515at 3956.036 kb on - strand, within ABZR86_RS17515at 3956.036 kb on - strand, within ABZR86_RS17515at 3956.036 kb on - strand, within ABZR86_RS17515at 3956.036 kb on - strand, within ABZR86_RS17515at 3956.061 kb on + strand, within ABZR86_RS17515at 3956.061 kb on + strand, within ABZR86_RS17515at 3956.348 kb on + strand, within ABZR86_RS17515at 3956.348 kb on + strand, within ABZR86_RS17515at 3956.349 kb on - strand, within ABZR86_RS17515at 3956.349 kb on - strand, within ABZR86_RS17515at 3956.349 kb on - strand, within ABZR86_RS17515at 3956.349 kb on - strand, within ABZR86_RS17515at 3956.451 kb on + strandat 3956.451 kb on + strandat 3956.498 kb on + strandat 3956.498 kb on + strandat 3956.499 kb on - strandat 3956.499 kb on - strandat 3956.499 kb on - strandat 3956.499 kb on - strandat 3956.499 kb on - strandat 3956.499 kb on - strandat 3956.587 kb on + strandat 3956.777 kb on + strandat 3956.777 kb on + strandat 3956.778 kb on - strandat 3956.778 kb on - strandat 3956.778 kb on - strandat 3956.778 kb on - strandat 3956.778 kb on - strandat 3956.778 kb on - strandat 3956.778 kb on - strandat 3956.778 kb on - strandat 3956.778 kb on - strandat 3956.778 kb on - strandat 3956.902 kb on + strand, within ABZR86_RS17520at 3956.902 kb on + strand, within ABZR86_RS17520at 3956.902 kb on + strand, within ABZR86_RS17520at 3956.902 kb on + strand, within ABZR86_RS17520at 3956.903 kb on - strand, within ABZR86_RS17520at 3956.908 kb on + strand, within ABZR86_RS17520at 3956.908 kb on + strand, within ABZR86_RS17520at 3956.908 kb on + strand, within ABZR86_RS17520at 3956.908 kb on + strand, within ABZR86_RS17520at 3956.909 kb on - strand, within ABZR86_RS17520at 3956.909 kb on - strand, within ABZR86_RS17520at 3956.909 kb on - strand, within ABZR86_RS17520at 3956.966 kb on - strand, within ABZR86_RS17520at 3956.966 kb on - strand, within ABZR86_RS17520at 3956.984 kb on - strand, within ABZR86_RS17520at 3957.025 kb on + strand, within ABZR86_RS17520at 3957.027 kb on + strand, within ABZR86_RS17520at 3957.106 kb on + strand, within ABZR86_RS17520at 3957.107 kb on - strand, within ABZR86_RS17520at 3957.107 kb on - strand, within ABZR86_RS17520at 3957.109 kb on + strand, within ABZR86_RS17520at 3957.109 kb on + strand, within ABZR86_RS17520at 3957.109 kb on + strand, within ABZR86_RS17520at 3957.109 kb on + strand, within ABZR86_RS17520at 3957.110 kb on - strand, within ABZR86_RS17520at 3957.110 kb on - strand, within ABZR86_RS17520at 3957.110 kb on - strand, within ABZR86_RS17520at 3957.110 kb on - strand, within ABZR86_RS17520at 3957.142 kb on + strand, within ABZR86_RS17520at 3957.142 kb on + strand, within ABZR86_RS17520at 3957.143 kb on - strand, within ABZR86_RS17520at 3957.143 kb on - strand, within ABZR86_RS17520at 3957.143 kb on - strand, within ABZR86_RS17520at 3957.143 kb on - strand, within ABZR86_RS17520at 3957.203 kb on + strand, within ABZR86_RS17520at 3957.204 kb on - strand, within ABZR86_RS17520at 3957.204 kb on - strand, within ABZR86_RS17520at 3957.229 kb on + strand, within ABZR86_RS17520at 3957.229 kb on + strand, within ABZR86_RS17520at 3957.229 kb on + strand, within ABZR86_RS17520at 3957.229 kb on + strand, within ABZR86_RS17520at 3957.230 kb on - strand, within ABZR86_RS17520at 3957.230 kb on - strand, within ABZR86_RS17520at 3957.260 kb on - strand, within ABZR86_RS17520at 3957.272 kb on + strand, within ABZR86_RS17520at 3957.272 kb on + strand, within ABZR86_RS17520at 3957.272 kb on + strand, within ABZR86_RS17520at 3957.272 kb on + strand, within ABZR86_RS17520at 3957.272 kb on + strand, within ABZR86_RS17520at 3957.272 kb on + strand, within ABZR86_RS17520at 3957.273 kb on - strand, within ABZR86_RS17520at 3957.273 kb on - strand, within ABZR86_RS17520at 3957.273 kb on - strand, within ABZR86_RS17520at 3957.273 kb on - strand, within ABZR86_RS17520at 3957.273 kb on - strand, within ABZR86_RS17520at 3957.273 kb on - strand, within ABZR86_RS17520at 3957.273 kb on - strand, within ABZR86_RS17520at 3957.273 kb on - strand, within ABZR86_RS17520at 3957.274 kb on + strand, within ABZR86_RS17520at 3957.274 kb on + strand, within ABZR86_RS17520at 3957.274 kb on + strand, within ABZR86_RS17520at 3957.274 kb on + strand, within ABZR86_RS17520at 3957.274 kb on + strand, within ABZR86_RS17520at 3957.274 kb on + strand, within ABZR86_RS17520at 3957.274 kb on + strand, within ABZR86_RS17520at 3957.274 kb on + strand, within ABZR86_RS17520at 3957.274 kb on + strand, within ABZR86_RS17520at 3957.274 kb on + strand, within ABZR86_RS17520at 3957.274 kb on + strand, within ABZR86_RS17520at 3957.275 kb on - strand, within ABZR86_RS17520at 3957.275 kb on - strand, within ABZR86_RS17520at 3957.275 kb on - strand, within ABZR86_RS17520at 3957.275 kb on - strand, within ABZR86_RS17520at 3957.275 kb on - strand, within ABZR86_RS17520at 3957.275 kb on - strand, within ABZR86_RS17520at 3957.383 kb on - strand, within ABZR86_RS17520at 3957.409 kb on + strand, within ABZR86_RS17520

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Per-strain Table

Position Strand Gene LocusTag Fraction N-Acetyl-D-glucosamine (N)
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3,954,895 + ABZR86_RS17510 0.65 -0.4
3,954,895 + ABZR86_RS17510 0.65 +0.2
3,954,896 - ABZR86_RS17510 0.65 -2.3
3,954,896 - ABZR86_RS17510 0.65 -1.4
3,954,896 - ABZR86_RS17510 0.65 -3.6
3,954,896 - ABZR86_RS17510 0.65 -0.4
3,955,129 + ABZR86_RS17510 0.76 +0.2
3,955,130 - ABZR86_RS17510 0.76 -0.6
3,955,130 - ABZR86_RS17510 0.76 -0.5
3,955,130 - ABZR86_RS17510 0.76 -1.4
3,955,174 + ABZR86_RS17510 0.78 -1.3
3,955,175 - ABZR86_RS17510 0.78 -1.5
3,955,175 - ABZR86_RS17510 0.78 -0.3
3,955,175 - ABZR86_RS17510 0.78 -1.1
3,955,175 - ABZR86_RS17510 0.78 -1.1
3,955,285 + ABZR86_RS17510 0.83 +0.1
3,955,688 + +0.4
3,955,689 - -0.5
3,955,689 - +0.2
3,955,689 - +0.6
3,955,689 - +0.2
3,955,689 - +0.1
3,955,689 - -0.6
3,955,698 + -0.6
3,955,699 - +0.7
3,955,699 - +0.8
3,955,699 - -0.2
3,955,879 + +0.5
3,955,879 + +0.5
3,955,879 + +0.8
3,955,879 + +0.5
3,955,879 + -0.1
3,955,880 - +0.8
3,955,948 - +0.2
3,955,948 - +1.3
3,955,955 + ABZR86_RS17515 0.10 -0.0
3,955,955 + ABZR86_RS17515 0.10 +0.0
3,955,956 - ABZR86_RS17515 0.11 +0.0
3,956,036 - ABZR86_RS17515 0.24 +0.2
3,956,036 - ABZR86_RS17515 0.24 -0.3
3,956,036 - ABZR86_RS17515 0.24 -0.1
3,956,036 - ABZR86_RS17515 0.24 -0.2
3,956,061 + ABZR86_RS17515 0.28 -0.5
3,956,061 + ABZR86_RS17515 0.28 -0.1
3,956,348 + ABZR86_RS17515 0.75 +0.9
3,956,348 + ABZR86_RS17515 0.75 +0.1
3,956,349 - ABZR86_RS17515 0.75 +0.2
3,956,349 - ABZR86_RS17515 0.75 -0.1
3,956,349 - ABZR86_RS17515 0.75 +0.2
3,956,349 - ABZR86_RS17515 0.75 +0.2
3,956,451 + +0.3
3,956,451 + -0.1
3,956,498 + -0.3
3,956,498 + -0.4
3,956,499 - +0.5
3,956,499 - +0.4
3,956,499 - -0.5
3,956,499 - +0.3
3,956,499 - +0.2
3,956,499 - -0.1
3,956,587 + -0.2
3,956,777 + +0.1
3,956,777 + -1.3
3,956,778 - +0.9
3,956,778 - -0.6
3,956,778 - +0.1
3,956,778 - -0.3
3,956,778 - +0.5
3,956,778 - +0.7
3,956,778 - +1.9
3,956,778 - -0.3
3,956,778 - -0.8
3,956,778 - +0.2
3,956,902 + ABZR86_RS17520 0.17 +0.2
3,956,902 + ABZR86_RS17520 0.17 +0.1
3,956,902 + ABZR86_RS17520 0.17 -0.5
3,956,902 + ABZR86_RS17520 0.17 -1.5
3,956,903 - ABZR86_RS17520 0.17 +0.4
3,956,908 + ABZR86_RS17520 0.17 +0.5
3,956,908 + ABZR86_RS17520 0.17 +1.1
3,956,908 + ABZR86_RS17520 0.17 -0.5
3,956,908 + ABZR86_RS17520 0.17 -0.5
3,956,909 - ABZR86_RS17520 0.17 -0.5
3,956,909 - ABZR86_RS17520 0.17 +0.6
3,956,909 - ABZR86_RS17520 0.17 -0.6
3,956,966 - ABZR86_RS17520 0.20 +0.3
3,956,966 - ABZR86_RS17520 0.20 -0.0
3,956,984 - ABZR86_RS17520 0.21 +0.4
3,957,025 + ABZR86_RS17520 0.24 -0.0
3,957,027 + ABZR86_RS17520 0.24 +0.2
3,957,106 + ABZR86_RS17520 0.28 +0.2
3,957,107 - ABZR86_RS17520 0.28 -0.4
3,957,107 - ABZR86_RS17520 0.28 -0.4
3,957,109 + ABZR86_RS17520 0.28 -0.0
3,957,109 + ABZR86_RS17520 0.28 -0.1
3,957,109 + ABZR86_RS17520 0.28 -0.4
3,957,109 + ABZR86_RS17520 0.28 +0.6
3,957,110 - ABZR86_RS17520 0.28 -0.8
3,957,110 - ABZR86_RS17520 0.28 +0.6
3,957,110 - ABZR86_RS17520 0.28 -0.1
3,957,110 - ABZR86_RS17520 0.28 +0.3
3,957,142 + ABZR86_RS17520 0.30 -0.0
3,957,142 + ABZR86_RS17520 0.30 -0.7
3,957,143 - ABZR86_RS17520 0.30 -0.3
3,957,143 - ABZR86_RS17520 0.30 +0.6
3,957,143 - ABZR86_RS17520 0.30 +0.6
3,957,143 - ABZR86_RS17520 0.30 -0.7
3,957,203 + ABZR86_RS17520 0.34 -0.2
3,957,204 - ABZR86_RS17520 0.34 +0.1
3,957,204 - ABZR86_RS17520 0.34 -0.4
3,957,229 + ABZR86_RS17520 0.35 +0.3
3,957,229 + ABZR86_RS17520 0.35 +0.7
3,957,229 + ABZR86_RS17520 0.35 -0.8
3,957,229 + ABZR86_RS17520 0.35 -0.2
3,957,230 - ABZR86_RS17520 0.35 +0.0
3,957,230 - ABZR86_RS17520 0.35 -0.6
3,957,260 - ABZR86_RS17520 0.37 +0.9
3,957,272 + ABZR86_RS17520 0.38 -0.0
3,957,272 + ABZR86_RS17520 0.38 +0.2
3,957,272 + ABZR86_RS17520 0.38 -0.4
3,957,272 + ABZR86_RS17520 0.38 +0.2
3,957,272 + ABZR86_RS17520 0.38 +0.0
3,957,272 + ABZR86_RS17520 0.38 -0.3
3,957,273 - ABZR86_RS17520 0.38 +0.6
3,957,273 - ABZR86_RS17520 0.38 -1.2
3,957,273 - ABZR86_RS17520 0.38 +0.8
3,957,273 - ABZR86_RS17520 0.38 +0.2
3,957,273 - ABZR86_RS17520 0.38 +0.0
3,957,273 - ABZR86_RS17520 0.38 +0.1
3,957,273 - ABZR86_RS17520 0.38 -0.8
3,957,273 - ABZR86_RS17520 0.38 -0.1
3,957,274 + ABZR86_RS17520 0.38 +0.4
3,957,274 + ABZR86_RS17520 0.38 +0.4
3,957,274 + ABZR86_RS17520 0.38 -0.9
3,957,274 + ABZR86_RS17520 0.38 +0.0
3,957,274 + ABZR86_RS17520 0.38 +0.2
3,957,274 + ABZR86_RS17520 0.38 -0.1
3,957,274 + ABZR86_RS17520 0.38 +0.2
3,957,274 + ABZR86_RS17520 0.38 +0.6
3,957,274 + ABZR86_RS17520 0.38 +0.6
3,957,274 + ABZR86_RS17520 0.38 +0.3
3,957,274 + ABZR86_RS17520 0.38 +0.1
3,957,275 - ABZR86_RS17520 0.38 -0.1
3,957,275 - ABZR86_RS17520 0.38 -0.5
3,957,275 - ABZR86_RS17520 0.38 +0.5
3,957,275 - ABZR86_RS17520 0.38 -0.8
3,957,275 - ABZR86_RS17520 0.38 -0.3
3,957,275 - ABZR86_RS17520 0.38 -0.2
3,957,383 - ABZR86_RS17520 0.44 -0.2
3,957,409 + ABZR86_RS17520 0.45 +0.6

Or see this region's nucleotide sequence