Experiment: N-Acetyl-D-glucosamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS13580 and ABZR86_RS13585 are separated by 0 nucleotides ABZR86_RS13585 and ABZR86_RS13590 are separated by 95 nucleotides ABZR86_RS13590 and ABZR86_RS13595 are separated by 45 nucleotides ABZR86_RS13595 and ABZR86_RS13600 are separated by 104 nucleotides
ABZR86_RS13580: ABZR86_RS13580 - pteridine-dependent deoxygenase, at 3,039,129 to 3,040,121
_RS13580
ABZR86_RS13585: ABZR86_RS13585 - DUF4850 domain-containing protein, at 3,040,122 to 3,040,898
_RS13585
ABZR86_RS13590: ABZR86_RS13590 - bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU, at 3,040,994 to 3,042,361
_RS13590
ABZR86_RS13595: ABZR86_RS13595 - hypothetical protein, at 3,042,407 to 3,042,958
_RS13595
ABZR86_RS13600: ABZR86_RS13600 - F0F1 ATP synthase subunit epsilon, at 3,043,063 to 3,043,488
_RS13600
Position (kb)
3040
3041
3042
3043 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3040.113 kb on + strand at 3040.114 kb on - strand at 3040.222 kb on + strand, within ABZR86_RS13585 at 3040.223 kb on - strand, within ABZR86_RS13585 at 3040.264 kb on - strand, within ABZR86_RS13585 at 3040.426 kb on + strand, within ABZR86_RS13585 at 3040.426 kb on + strand, within ABZR86_RS13585 at 3040.426 kb on + strand, within ABZR86_RS13585 at 3040.426 kb on + strand, within ABZR86_RS13585 at 3040.427 kb on - strand, within ABZR86_RS13585 at 3040.427 kb on - strand, within ABZR86_RS13585 at 3040.427 kb on - strand, within ABZR86_RS13585 at 3040.427 kb on - strand, within ABZR86_RS13585 at 3040.427 kb on - strand, within ABZR86_RS13585 at 3040.427 kb on - strand, within ABZR86_RS13585 at 3040.588 kb on + strand, within ABZR86_RS13585 at 3040.588 kb on + strand, within ABZR86_RS13585 at 3040.589 kb on - strand, within ABZR86_RS13585 at 3040.589 kb on - strand, within ABZR86_RS13585 at 3040.589 kb on - strand, within ABZR86_RS13585 at 3040.589 kb on - strand, within ABZR86_RS13585 at 3040.762 kb on + strand, within ABZR86_RS13585 at 3040.763 kb on - strand, within ABZR86_RS13585 at 3040.763 kb on - strand, within ABZR86_RS13585 at 3040.763 kb on - strand, within ABZR86_RS13585 at 3040.786 kb on + strand, within ABZR86_RS13585 at 3040.786 kb on + strand, within ABZR86_RS13585 at 3040.786 kb on + strand, within ABZR86_RS13585 at 3040.786 kb on + strand, within ABZR86_RS13585 at 3040.787 kb on - strand, within ABZR86_RS13585 at 3040.995 kb on + strand at 3040.995 kb on + strand at 3040.996 kb on - strand at 3040.996 kb on - strand at 3040.996 kb on - strand at 3040.996 kb on - strand at 3042.398 kb on - strand at 3042.471 kb on + strand, within ABZR86_RS13595 at 3042.472 kb on - strand, within ABZR86_RS13595 at 3042.472 kb on - strand, within ABZR86_RS13595 at 3042.620 kb on - strand, within ABZR86_RS13595 at 3042.620 kb on - strand, within ABZR86_RS13595 at 3042.620 kb on - strand, within ABZR86_RS13595 at 3042.620 kb on - strand, within ABZR86_RS13595 at 3042.620 kb on - strand, within ABZR86_RS13595 at 3042.621 kb on + strand, within ABZR86_RS13595 at 3042.621 kb on + strand, within ABZR86_RS13595 at 3042.621 kb on + strand, within ABZR86_RS13595 at 3042.621 kb on + strand, within ABZR86_RS13595 at 3042.622 kb on - strand, within ABZR86_RS13595 at 3042.622 kb on - strand, within ABZR86_RS13595 at 3042.622 kb on - strand, within ABZR86_RS13595 at 3042.622 kb on - strand, within ABZR86_RS13595 at 3042.622 kb on - strand, within ABZR86_RS13595 at 3042.622 kb on - strand, within ABZR86_RS13595 at 3042.665 kb on + strand, within ABZR86_RS13595 at 3042.665 kb on + strand, within ABZR86_RS13595 at 3042.666 kb on - strand, within ABZR86_RS13595 at 3042.666 kb on - strand, within ABZR86_RS13595 at 3042.753 kb on + strand, within ABZR86_RS13595 at 3042.816 kb on + strand, within ABZR86_RS13595 at 3043.031 kb on + strand at 3043.031 kb on + strand at 3043.031 kb on + strand at 3043.031 kb on + strand at 3043.031 kb on + strand at 3043.031 kb on + strand at 3043.031 kb on + strand at 3043.032 kb on - strand at 3043.032 kb on - strand at 3043.032 kb on - strand at 3043.032 kb on - strand at 3043.032 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction N-Acetyl-D-glucosamine (N) remove 3,040,113 + +0.1 3,040,114 - -0.0 3,040,222 + ABZR86_RS13585 0.13 +0.1 3,040,223 - ABZR86_RS13585 0.13 -0.6 3,040,264 - ABZR86_RS13585 0.18 +0.4 3,040,426 + ABZR86_RS13585 0.39 -0.0 3,040,426 + ABZR86_RS13585 0.39 -0.2 3,040,426 + ABZR86_RS13585 0.39 -0.4 3,040,426 + ABZR86_RS13585 0.39 -0.2 3,040,427 - ABZR86_RS13585 0.39 -0.7 3,040,427 - ABZR86_RS13585 0.39 -0.2 3,040,427 - ABZR86_RS13585 0.39 +2.1 3,040,427 - ABZR86_RS13585 0.39 -0.5 3,040,427 - ABZR86_RS13585 0.39 -0.6 3,040,427 - ABZR86_RS13585 0.39 -0.2 3,040,588 + ABZR86_RS13585 0.60 +0.5 3,040,588 + ABZR86_RS13585 0.60 +0.6 3,040,589 - ABZR86_RS13585 0.60 -0.2 3,040,589 - ABZR86_RS13585 0.60 -0.2 3,040,589 - ABZR86_RS13585 0.60 +0.1 3,040,589 - ABZR86_RS13585 0.60 -0.0 3,040,762 + ABZR86_RS13585 0.82 +0.1 3,040,763 - ABZR86_RS13585 0.82 +0.3 3,040,763 - ABZR86_RS13585 0.82 +0.3 3,040,763 - ABZR86_RS13585 0.82 +0.9 3,040,786 + ABZR86_RS13585 0.85 -0.1 3,040,786 + ABZR86_RS13585 0.85 -0.3 3,040,786 + ABZR86_RS13585 0.85 -0.3 3,040,786 + ABZR86_RS13585 0.85 +0.4 3,040,787 - ABZR86_RS13585 0.86 -0.5 3,040,995 + +0.2 3,040,995 + +0.2 3,040,996 - +0.3 3,040,996 - -0.1 3,040,996 - +0.1 3,040,996 - -0.1 3,042,398 - -0.1 3,042,471 + ABZR86_RS13595 0.12 -0.3 3,042,472 - ABZR86_RS13595 0.12 +0.0 3,042,472 - ABZR86_RS13595 0.12 -0.8 3,042,620 - ABZR86_RS13595 0.39 -0.1 3,042,620 - ABZR86_RS13595 0.39 +0.5 3,042,620 - ABZR86_RS13595 0.39 -0.3 3,042,620 - ABZR86_RS13595 0.39 -1.9 3,042,620 - ABZR86_RS13595 0.39 +0.7 3,042,621 + ABZR86_RS13595 0.39 -0.3 3,042,621 + ABZR86_RS13595 0.39 -1.5 3,042,621 + ABZR86_RS13595 0.39 -0.2 3,042,621 + ABZR86_RS13595 0.39 +0.3 3,042,622 - ABZR86_RS13595 0.39 +0.6 3,042,622 - ABZR86_RS13595 0.39 +0.1 3,042,622 - ABZR86_RS13595 0.39 -0.0 3,042,622 - ABZR86_RS13595 0.39 +0.1 3,042,622 - ABZR86_RS13595 0.39 -0.2 3,042,622 - ABZR86_RS13595 0.39 +0.1 3,042,665 + ABZR86_RS13595 0.47 -0.8 3,042,665 + ABZR86_RS13595 0.47 -0.2 3,042,666 - ABZR86_RS13595 0.47 -0.4 3,042,666 - ABZR86_RS13595 0.47 +0.1 3,042,753 + ABZR86_RS13595 0.63 +1.2 3,042,816 + ABZR86_RS13595 0.74 +0.0 3,043,031 + -0.1 3,043,031 + -0.3 3,043,031 + -0.9 3,043,031 + -0.3 3,043,031 + -0.2 3,043,031 + +0.6 3,043,031 + -0.6 3,043,032 - -1.4 3,043,032 - -0.7 3,043,032 - +1.7 3,043,032 - -0.9 3,043,032 - -0.4
Or see this region's nucleotide sequence