Experiment: N-Acetyl-D-glucosamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS11940 and ABZR86_RS11945 are separated by 80 nucleotides ABZR86_RS11945 and ABZR86_RS11950 are separated by 127 nucleotides ABZR86_RS11950 and ABZR86_RS11955 overlap by 4 nucleotides
ABZR86_RS11940: ABZR86_RS11940 - Xaa-Pro dipeptidase, at 2,677,031 to 2,678,353
_RS11940
ABZR86_RS11945: ABZR86_RS11945 - hypothetical protein, at 2,678,434 to 2,678,823
_RS11945
ABZR86_RS11950: ABZR86_RS11950 - cytochrome oxidase putative small subunit CydP, at 2,678,951 to 2,679,187
_RS11950
ABZR86_RS11955: ABZR86_RS11955 - cytochrome ubiquinol oxidase subunit I, at 2,679,184 to 2,680,761
_RS11955
Position (kb)
2678
2679 Strain fitness (log2 ratio)
-1
0
1 at 2677.503 kb on - strand, within ABZR86_RS11940 at 2677.503 kb on - strand, within ABZR86_RS11940 at 2677.514 kb on + strand, within ABZR86_RS11940 at 2677.622 kb on + strand, within ABZR86_RS11940 at 2677.622 kb on + strand, within ABZR86_RS11940 at 2677.622 kb on + strand, within ABZR86_RS11940 at 2677.623 kb on - strand, within ABZR86_RS11940 at 2677.661 kb on + strand, within ABZR86_RS11940 at 2677.706 kb on + strand, within ABZR86_RS11940 at 2677.737 kb on - strand, within ABZR86_RS11940 at 2677.737 kb on - strand, within ABZR86_RS11940 at 2677.805 kb on + strand, within ABZR86_RS11940 at 2677.805 kb on + strand, within ABZR86_RS11940 at 2677.805 kb on + strand, within ABZR86_RS11940 at 2677.805 kb on + strand, within ABZR86_RS11940 at 2677.805 kb on + strand, within ABZR86_RS11940 at 2677.805 kb on + strand, within ABZR86_RS11940 at 2677.806 kb on - strand, within ABZR86_RS11940 at 2677.806 kb on - strand, within ABZR86_RS11940 at 2677.806 kb on - strand, within ABZR86_RS11940 at 2677.902 kb on - strand, within ABZR86_RS11940 at 2678.121 kb on - strand, within ABZR86_RS11940 at 2678.121 kb on - strand, within ABZR86_RS11940 at 2678.180 kb on + strand, within ABZR86_RS11940 at 2678.180 kb on + strand, within ABZR86_RS11940 at 2678.181 kb on - strand, within ABZR86_RS11940 at 2678.917 kb on - strand at 2678.917 kb on - strand at 2678.917 kb on - strand at 2679.244 kb on + strand at 2679.244 kb on + strand at 2679.244 kb on + strand at 2679.440 kb on - strand, within ABZR86_RS11955 at 2679.440 kb on - strand, within ABZR86_RS11955 at 2679.442 kb on + strand, within ABZR86_RS11955 at 2679.442 kb on + strand, within ABZR86_RS11955 at 2679.443 kb on - strand, within ABZR86_RS11955 at 2679.443 kb on - strand, within ABZR86_RS11955 at 2679.451 kb on + strand, within ABZR86_RS11955 at 2679.452 kb on - strand, within ABZR86_RS11955 at 2679.452 kb on - strand, within ABZR86_RS11955 at 2679.766 kb on + strand, within ABZR86_RS11955 at 2679.766 kb on + strand, within ABZR86_RS11955 at 2679.808 kb on + strand, within ABZR86_RS11955 at 2679.809 kb on - strand, within ABZR86_RS11955
Per-strain Table
Position Strand Gene LocusTag Fraction N-Acetyl-D-glucosamine (N) remove 2,677,503 - ABZR86_RS11940 0.36 +0.9 2,677,503 - ABZR86_RS11940 0.36 -0.0 2,677,514 + ABZR86_RS11940 0.37 +0.5 2,677,622 + ABZR86_RS11940 0.45 -0.6 2,677,622 + ABZR86_RS11940 0.45 -0.2 2,677,622 + ABZR86_RS11940 0.45 +0.6 2,677,623 - ABZR86_RS11940 0.45 +1.3 2,677,661 + ABZR86_RS11940 0.48 +1.1 2,677,706 + ABZR86_RS11940 0.51 +1.0 2,677,737 - ABZR86_RS11940 0.53 -0.5 2,677,737 - ABZR86_RS11940 0.53 +0.5 2,677,805 + ABZR86_RS11940 0.59 +0.1 2,677,805 + ABZR86_RS11940 0.59 -0.7 2,677,805 + ABZR86_RS11940 0.59 -0.2 2,677,805 + ABZR86_RS11940 0.59 -0.0 2,677,805 + ABZR86_RS11940 0.59 +0.5 2,677,805 + ABZR86_RS11940 0.59 +0.5 2,677,806 - ABZR86_RS11940 0.59 +0.4 2,677,806 - ABZR86_RS11940 0.59 +0.6 2,677,806 - ABZR86_RS11940 0.59 -0.3 2,677,902 - ABZR86_RS11940 0.66 +0.2 2,678,121 - ABZR86_RS11940 0.82 -0.3 2,678,121 - ABZR86_RS11940 0.82 -1.6 2,678,180 + ABZR86_RS11940 0.87 +0.4 2,678,180 + ABZR86_RS11940 0.87 +1.3 2,678,181 - ABZR86_RS11940 0.87 +0.9 2,678,917 - -0.6 2,678,917 - -0.3 2,678,917 - +0.3 2,679,244 + -0.8 2,679,244 + +0.1 2,679,244 + +0.5 2,679,440 - ABZR86_RS11955 0.16 +0.3 2,679,440 - ABZR86_RS11955 0.16 +0.1 2,679,442 + ABZR86_RS11955 0.16 -0.8 2,679,442 + ABZR86_RS11955 0.16 +1.1 2,679,443 - ABZR86_RS11955 0.16 +0.0 2,679,443 - ABZR86_RS11955 0.16 -0.5 2,679,451 + ABZR86_RS11955 0.17 -1.6 2,679,452 - ABZR86_RS11955 0.17 -1.0 2,679,452 - ABZR86_RS11955 0.17 -0.2 2,679,766 + ABZR86_RS11955 0.37 -0.8 2,679,766 + ABZR86_RS11955 0.37 -0.3 2,679,808 + ABZR86_RS11955 0.40 -0.1 2,679,809 - ABZR86_RS11955 0.40 +0.4
Or see this region's nucleotide sequence