Experiment: N-Acetyl-D-glucosamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS10315 and ABZR86_RS10320 are separated by 0 nucleotides ABZR86_RS10320 and ABZR86_RS10325 are separated by 24 nucleotides
ABZR86_RS10315: ABZR86_RS10315 - Imm42 family immunity protein, at 2,285,143 to 2,285,661
_RS10315
ABZR86_RS10320: ABZR86_RS10320 - RHS repeat-associated core domain-containing protein, at 2,285,662 to 2,286,384
_RS10320
ABZR86_RS10325: ABZR86_RS10325 - RHS repeat protein, at 2,286,409 to 2,288,874
_RS10325
Position (kb)
2285
2286
2287 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2284.710 kb on - strand at 2284.809 kb on + strand at 2284.810 kb on - strand at 2284.814 kb on - strand at 2284.820 kb on - strand at 2284.868 kb on + strand at 2284.874 kb on + strand at 2284.928 kb on + strand at 2285.166 kb on + strand at 2285.287 kb on - strand, within ABZR86_RS10315 at 2285.303 kb on - strand, within ABZR86_RS10315 at 2285.313 kb on + strand, within ABZR86_RS10315 at 2285.358 kb on - strand, within ABZR86_RS10315 at 2285.358 kb on - strand, within ABZR86_RS10315 at 2285.369 kb on + strand, within ABZR86_RS10315 at 2285.369 kb on + strand, within ABZR86_RS10315 at 2285.370 kb on - strand, within ABZR86_RS10315 at 2285.459 kb on - strand, within ABZR86_RS10315 at 2285.548 kb on - strand, within ABZR86_RS10315 at 2285.591 kb on + strand, within ABZR86_RS10315 at 2285.690 kb on + strand at 2285.774 kb on + strand, within ABZR86_RS10320 at 2285.817 kb on + strand, within ABZR86_RS10320 at 2285.820 kb on + strand, within ABZR86_RS10320 at 2285.829 kb on + strand, within ABZR86_RS10320 at 2285.925 kb on + strand, within ABZR86_RS10320 at 2285.926 kb on - strand, within ABZR86_RS10320 at 2285.926 kb on - strand, within ABZR86_RS10320 at 2285.930 kb on + strand, within ABZR86_RS10320 at 2285.930 kb on + strand, within ABZR86_RS10320 at 2285.930 kb on + strand, within ABZR86_RS10320 at 2285.931 kb on - strand, within ABZR86_RS10320 at 2285.931 kb on - strand, within ABZR86_RS10320 at 2285.940 kb on + strand, within ABZR86_RS10320 at 2285.960 kb on - strand, within ABZR86_RS10320 at 2286.044 kb on + strand, within ABZR86_RS10320 at 2286.081 kb on + strand, within ABZR86_RS10320 at 2286.081 kb on + strand, within ABZR86_RS10320 at 2286.082 kb on - strand, within ABZR86_RS10320 at 2286.082 kb on - strand, within ABZR86_RS10320 at 2286.208 kb on + strand, within ABZR86_RS10320 at 2286.209 kb on - strand, within ABZR86_RS10320 at 2286.212 kb on + strand, within ABZR86_RS10320 at 2286.212 kb on + strand, within ABZR86_RS10320 at 2286.213 kb on - strand, within ABZR86_RS10320 at 2286.213 kb on - strand, within ABZR86_RS10320 at 2286.213 kb on - strand, within ABZR86_RS10320 at 2286.218 kb on + strand, within ABZR86_RS10320 at 2286.218 kb on + strand, within ABZR86_RS10320 at 2286.218 kb on + strand, within ABZR86_RS10320 at 2286.219 kb on - strand, within ABZR86_RS10320 at 2286.219 kb on - strand, within ABZR86_RS10320 at 2286.219 kb on - strand, within ABZR86_RS10320 at 2286.219 kb on - strand, within ABZR86_RS10320 at 2286.219 kb on - strand, within ABZR86_RS10320 at 2286.219 kb on - strand, within ABZR86_RS10320 at 2286.219 kb on - strand, within ABZR86_RS10320 at 2286.263 kb on + strand, within ABZR86_RS10320 at 2286.263 kb on + strand, within ABZR86_RS10320 at 2286.263 kb on + strand, within ABZR86_RS10320 at 2286.264 kb on - strand, within ABZR86_RS10320 at 2286.285 kb on - strand, within ABZR86_RS10320 at 2286.302 kb on + strand, within ABZR86_RS10320 at 2286.302 kb on + strand, within ABZR86_RS10320 at 2286.302 kb on + strand, within ABZR86_RS10320 at 2286.326 kb on + strand at 2286.327 kb on - strand at 2286.327 kb on - strand at 2286.329 kb on + strand at 2286.330 kb on - strand at 2286.330 kb on - strand at 2286.404 kb on + strand at 2286.404 kb on + strand at 2286.405 kb on - strand at 2286.405 kb on - strand at 2286.410 kb on + strand at 2286.411 kb on - strand at 2286.479 kb on + strand at 2286.479 kb on + strand at 2286.480 kb on - strand at 2286.545 kb on + strand at 2286.545 kb on + strand at 2286.546 kb on - strand at 2286.567 kb on - strand at 2286.596 kb on + strand at 2286.597 kb on - strand at 2286.653 kb on + strand at 2286.654 kb on - strand at 2286.659 kb on + strand, within ABZR86_RS10325 at 2286.659 kb on + strand, within ABZR86_RS10325 at 2286.660 kb on - strand, within ABZR86_RS10325 at 2286.717 kb on - strand, within ABZR86_RS10325 at 2286.717 kb on - strand, within ABZR86_RS10325 at 2286.890 kb on + strand, within ABZR86_RS10325 at 2286.891 kb on - strand, within ABZR86_RS10325 at 2286.891 kb on - strand, within ABZR86_RS10325 at 2286.956 kb on + strand, within ABZR86_RS10325 at 2286.957 kb on - strand, within ABZR86_RS10325 at 2286.957 kb on - strand, within ABZR86_RS10325 at 2286.957 kb on - strand, within ABZR86_RS10325 at 2286.962 kb on + strand, within ABZR86_RS10325 at 2286.962 kb on + strand, within ABZR86_RS10325 at 2286.962 kb on + strand, within ABZR86_RS10325 at 2286.962 kb on + strand, within ABZR86_RS10325 at 2286.962 kb on + strand, within ABZR86_RS10325 at 2286.963 kb on - strand, within ABZR86_RS10325 at 2287.076 kb on + strand, within ABZR86_RS10325 at 2287.076 kb on + strand, within ABZR86_RS10325 at 2287.077 kb on - strand, within ABZR86_RS10325 at 2287.077 kb on - strand, within ABZR86_RS10325 at 2287.077 kb on - strand, within ABZR86_RS10325 at 2287.077 kb on - strand, within ABZR86_RS10325 at 2287.088 kb on + strand, within ABZR86_RS10325 at 2287.088 kb on + strand, within ABZR86_RS10325 at 2287.151 kb on + strand, within ABZR86_RS10325 at 2287.152 kb on - strand, within ABZR86_RS10325 at 2287.152 kb on - strand, within ABZR86_RS10325 at 2287.152 kb on - strand, within ABZR86_RS10325 at 2287.272 kb on + strand, within ABZR86_RS10325 at 2287.273 kb on - strand, within ABZR86_RS10325 at 2287.304 kb on + strand, within ABZR86_RS10325 at 2287.304 kb on + strand, within ABZR86_RS10325 at 2287.305 kb on - strand, within ABZR86_RS10325 at 2287.305 kb on - strand, within ABZR86_RS10325 at 2287.310 kb on + strand, within ABZR86_RS10325 at 2287.310 kb on + strand, within ABZR86_RS10325 at 2287.310 kb on + strand, within ABZR86_RS10325 at 2287.310 kb on + strand, within ABZR86_RS10325 at 2287.310 kb on + strand, within ABZR86_RS10325 at 2287.311 kb on - strand, within ABZR86_RS10325 at 2287.382 kb on + strand, within ABZR86_RS10325 at 2287.382 kb on + strand, within ABZR86_RS10325 at 2287.383 kb on - strand, within ABZR86_RS10325
Per-strain Table
Position Strand Gene LocusTag Fraction N-Acetyl-D-glucosamine (N) remove 2,284,710 - -0.1 2,284,809 + +0.7 2,284,810 - -0.5 2,284,814 - +0.9 2,284,820 - +0.1 2,284,868 + +0.6 2,284,874 + -0.3 2,284,928 + +0.2 2,285,166 + -0.3 2,285,287 - ABZR86_RS10315 0.28 +0.3 2,285,303 - ABZR86_RS10315 0.31 -1.3 2,285,313 + ABZR86_RS10315 0.33 -2.0 2,285,358 - ABZR86_RS10315 0.41 -1.1 2,285,358 - ABZR86_RS10315 0.41 -0.4 2,285,369 + ABZR86_RS10315 0.44 -1.9 2,285,369 + ABZR86_RS10315 0.44 -1.1 2,285,370 - ABZR86_RS10315 0.44 -1.0 2,285,459 - ABZR86_RS10315 0.61 -1.0 2,285,548 - ABZR86_RS10315 0.78 -1.2 2,285,591 + ABZR86_RS10315 0.86 -1.2 2,285,690 + +0.1 2,285,774 + ABZR86_RS10320 0.15 +0.4 2,285,817 + ABZR86_RS10320 0.21 +0.6 2,285,820 + ABZR86_RS10320 0.22 +0.2 2,285,829 + ABZR86_RS10320 0.23 +0.8 2,285,925 + ABZR86_RS10320 0.36 +0.1 2,285,926 - ABZR86_RS10320 0.37 +0.7 2,285,926 - ABZR86_RS10320 0.37 +0.1 2,285,930 + ABZR86_RS10320 0.37 -0.1 2,285,930 + ABZR86_RS10320 0.37 -0.1 2,285,930 + ABZR86_RS10320 0.37 +0.4 2,285,931 - ABZR86_RS10320 0.37 -0.7 2,285,931 - ABZR86_RS10320 0.37 +0.1 2,285,940 + ABZR86_RS10320 0.38 -0.6 2,285,960 - ABZR86_RS10320 0.41 -0.2 2,286,044 + ABZR86_RS10320 0.53 -0.8 2,286,081 + ABZR86_RS10320 0.58 +2.0 2,286,081 + ABZR86_RS10320 0.58 +0.4 2,286,082 - ABZR86_RS10320 0.58 +0.4 2,286,082 - ABZR86_RS10320 0.58 +1.1 2,286,208 + ABZR86_RS10320 0.76 -0.2 2,286,209 - ABZR86_RS10320 0.76 -0.1 2,286,212 + ABZR86_RS10320 0.76 +0.9 2,286,212 + ABZR86_RS10320 0.76 +0.1 2,286,213 - ABZR86_RS10320 0.76 +0.0 2,286,213 - ABZR86_RS10320 0.76 -0.1 2,286,213 - ABZR86_RS10320 0.76 +0.4 2,286,218 + ABZR86_RS10320 0.77 +0.5 2,286,218 + ABZR86_RS10320 0.77 +0.1 2,286,218 + ABZR86_RS10320 0.77 +0.2 2,286,219 - ABZR86_RS10320 0.77 -0.2 2,286,219 - ABZR86_RS10320 0.77 +0.9 2,286,219 - ABZR86_RS10320 0.77 -0.7 2,286,219 - ABZR86_RS10320 0.77 -0.5 2,286,219 - ABZR86_RS10320 0.77 +0.4 2,286,219 - ABZR86_RS10320 0.77 -0.3 2,286,219 - ABZR86_RS10320 0.77 -0.3 2,286,263 + ABZR86_RS10320 0.83 +0.5 2,286,263 + ABZR86_RS10320 0.83 +0.6 2,286,263 + ABZR86_RS10320 0.83 +0.0 2,286,264 - ABZR86_RS10320 0.83 +0.4 2,286,285 - ABZR86_RS10320 0.86 -1.4 2,286,302 + ABZR86_RS10320 0.89 -0.3 2,286,302 + ABZR86_RS10320 0.89 +0.3 2,286,302 + ABZR86_RS10320 0.89 -0.0 2,286,326 + +0.2 2,286,327 - +0.2 2,286,327 - +0.1 2,286,329 + +0.1 2,286,330 - +0.5 2,286,330 - -0.1 2,286,404 + +0.3 2,286,404 + -0.2 2,286,405 - +0.2 2,286,405 - -0.1 2,286,410 + -0.4 2,286,411 - -0.5 2,286,479 + -0.1 2,286,479 + -0.1 2,286,480 - +0.1 2,286,545 + +0.4 2,286,545 + -0.2 2,286,546 - -0.7 2,286,567 - -0.8 2,286,596 + +0.2 2,286,597 - -0.2 2,286,653 + -0.3 2,286,654 - -0.3 2,286,659 + ABZR86_RS10325 0.10 -0.6 2,286,659 + ABZR86_RS10325 0.10 +0.4 2,286,660 - ABZR86_RS10325 0.10 +0.3 2,286,717 - ABZR86_RS10325 0.12 +0.4 2,286,717 - ABZR86_RS10325 0.12 +0.3 2,286,890 + ABZR86_RS10325 0.20 +0.7 2,286,891 - ABZR86_RS10325 0.20 +0.0 2,286,891 - ABZR86_RS10325 0.20 -0.3 2,286,956 + ABZR86_RS10325 0.22 -1.2 2,286,957 - ABZR86_RS10325 0.22 -0.3 2,286,957 - ABZR86_RS10325 0.22 -0.3 2,286,957 - ABZR86_RS10325 0.22 +0.6 2,286,962 + ABZR86_RS10325 0.22 +0.3 2,286,962 + ABZR86_RS10325 0.22 -0.2 2,286,962 + ABZR86_RS10325 0.22 +0.2 2,286,962 + ABZR86_RS10325 0.22 +0.7 2,286,962 + ABZR86_RS10325 0.22 -0.4 2,286,963 - ABZR86_RS10325 0.22 +1.3 2,287,076 + ABZR86_RS10325 0.27 +0.7 2,287,076 + ABZR86_RS10325 0.27 -0.1 2,287,077 - ABZR86_RS10325 0.27 +0.1 2,287,077 - ABZR86_RS10325 0.27 -0.2 2,287,077 - ABZR86_RS10325 0.27 +0.1 2,287,077 - ABZR86_RS10325 0.27 +0.9 2,287,088 + ABZR86_RS10325 0.28 +0.0 2,287,088 + ABZR86_RS10325 0.28 -0.3 2,287,151 + ABZR86_RS10325 0.30 -0.1 2,287,152 - ABZR86_RS10325 0.30 -0.4 2,287,152 - ABZR86_RS10325 0.30 +0.0 2,287,152 - ABZR86_RS10325 0.30 -0.2 2,287,272 + ABZR86_RS10325 0.35 -0.1 2,287,273 - ABZR86_RS10325 0.35 -0.2 2,287,304 + ABZR86_RS10325 0.36 -0.5 2,287,304 + ABZR86_RS10325 0.36 -0.2 2,287,305 - ABZR86_RS10325 0.36 +0.0 2,287,305 - ABZR86_RS10325 0.36 +0.0 2,287,310 + ABZR86_RS10325 0.37 +0.2 2,287,310 + ABZR86_RS10325 0.37 +0.3 2,287,310 + ABZR86_RS10325 0.37 +1.7 2,287,310 + ABZR86_RS10325 0.37 +0.7 2,287,310 + ABZR86_RS10325 0.37 -0.7 2,287,311 - ABZR86_RS10325 0.37 -0.0 2,287,382 + ABZR86_RS10325 0.39 +0.7 2,287,382 + ABZR86_RS10325 0.39 +0.9 2,287,383 - ABZR86_RS10325 0.39 -0.2
Or see this region's nucleotide sequence