Experiment: N-Acetyl-D-glucosamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS09355 and ABZR86_RS09360 overlap by 4 nucleotides ABZR86_RS09360 and ABZR86_RS09365 are separated by 4 nucleotides ABZR86_RS09365 and ABZR86_RS09370 are separated by 35 nucleotides
ABZR86_RS09355: ABZR86_RS09355 - sulfite reductase flavoprotein subunit alpha, at 2,083,758 to 2,085,362
_RS09355
ABZR86_RS09360: ABZR86_RS09360 - FAD:protein FMN transferase, at 2,085,359 to 2,086,315
_RS09360
ABZR86_RS09365: ABZR86_RS09365 - DUF4198 domain-containing protein, at 2,086,320 to 2,087,132
_RS09365
ABZR86_RS09370: ABZR86_RS09370 - DUF2271 domain-containing protein, at 2,087,168 to 2,087,683
_RS09370
Position (kb)
2085
2086
2087 Strain fitness (log2 ratio)
-1
0
1 at 2084.873 kb on - strand, within ABZR86_RS09355 at 2085.109 kb on + strand, within ABZR86_RS09355 at 2085.110 kb on - strand, within ABZR86_RS09355 at 2085.110 kb on - strand, within ABZR86_RS09355 at 2085.110 kb on - strand, within ABZR86_RS09355 at 2085.543 kb on - strand, within ABZR86_RS09360 at 2085.684 kb on + strand, within ABZR86_RS09360 at 2085.685 kb on - strand, within ABZR86_RS09360 at 2085.862 kb on + strand, within ABZR86_RS09360 at 2085.863 kb on - strand, within ABZR86_RS09360 at 2085.863 kb on - strand, within ABZR86_RS09360 at 2085.864 kb on + strand, within ABZR86_RS09360 at 2085.864 kb on + strand, within ABZR86_RS09360 at 2085.864 kb on + strand, within ABZR86_RS09360 at 2085.865 kb on - strand, within ABZR86_RS09360 at 2085.865 kb on - strand, within ABZR86_RS09360 at 2086.032 kb on + strand, within ABZR86_RS09360 at 2086.158 kb on + strand, within ABZR86_RS09360 at 2086.159 kb on - strand, within ABZR86_RS09360 at 2086.159 kb on - strand, within ABZR86_RS09360 at 2086.420 kb on + strand, within ABZR86_RS09365 at 2086.421 kb on - strand, within ABZR86_RS09365 at 2086.421 kb on - strand, within ABZR86_RS09365 at 2086.798 kb on + strand, within ABZR86_RS09365 at 2086.798 kb on + strand, within ABZR86_RS09365 at 2086.799 kb on - strand, within ABZR86_RS09365 at 2086.837 kb on + strand, within ABZR86_RS09365 at 2086.838 kb on - strand, within ABZR86_RS09365 at 2086.838 kb on - strand, within ABZR86_RS09365 at 2086.879 kb on + strand, within ABZR86_RS09365 at 2086.879 kb on + strand, within ABZR86_RS09365 at 2086.880 kb on - strand, within ABZR86_RS09365 at 2086.880 kb on - strand, within ABZR86_RS09365 at 2086.880 kb on - strand, within ABZR86_RS09365 at 2087.313 kb on + strand, within ABZR86_RS09370 at 2087.313 kb on + strand, within ABZR86_RS09370 at 2087.313 kb on + strand, within ABZR86_RS09370 at 2087.314 kb on - strand, within ABZR86_RS09370
Per-strain Table
Position Strand Gene LocusTag Fraction N-Acetyl-D-glucosamine (N) remove 2,084,873 - ABZR86_RS09355 0.69 +0.4 2,085,109 + ABZR86_RS09355 0.84 +1.1 2,085,110 - ABZR86_RS09355 0.84 +0.1 2,085,110 - ABZR86_RS09355 0.84 -0.7 2,085,110 - ABZR86_RS09355 0.84 -0.6 2,085,543 - ABZR86_RS09360 0.19 -0.3 2,085,684 + ABZR86_RS09360 0.34 +0.0 2,085,685 - ABZR86_RS09360 0.34 +0.3 2,085,862 + ABZR86_RS09360 0.53 -0.1 2,085,863 - ABZR86_RS09360 0.53 -0.2 2,085,863 - ABZR86_RS09360 0.53 +0.3 2,085,864 + ABZR86_RS09360 0.53 +0.7 2,085,864 + ABZR86_RS09360 0.53 -0.1 2,085,864 + ABZR86_RS09360 0.53 +0.1 2,085,865 - ABZR86_RS09360 0.53 +0.0 2,085,865 - ABZR86_RS09360 0.53 +0.2 2,086,032 + ABZR86_RS09360 0.70 +0.4 2,086,158 + ABZR86_RS09360 0.83 +0.5 2,086,159 - ABZR86_RS09360 0.84 +0.3 2,086,159 - ABZR86_RS09360 0.84 +0.8 2,086,420 + ABZR86_RS09365 0.12 -0.0 2,086,421 - ABZR86_RS09365 0.12 +0.5 2,086,421 - ABZR86_RS09365 0.12 -0.2 2,086,798 + ABZR86_RS09365 0.59 -0.6 2,086,798 + ABZR86_RS09365 0.59 +0.1 2,086,799 - ABZR86_RS09365 0.59 -0.2 2,086,837 + ABZR86_RS09365 0.64 +0.6 2,086,838 - ABZR86_RS09365 0.64 +0.5 2,086,838 - ABZR86_RS09365 0.64 +0.6 2,086,879 + ABZR86_RS09365 0.69 -0.0 2,086,879 + ABZR86_RS09365 0.69 +0.0 2,086,880 - ABZR86_RS09365 0.69 -0.0 2,086,880 - ABZR86_RS09365 0.69 +0.1 2,086,880 - ABZR86_RS09365 0.69 +1.0 2,087,313 + ABZR86_RS09370 0.28 -0.6 2,087,313 + ABZR86_RS09370 0.28 -0.4 2,087,313 + ABZR86_RS09370 0.28 -0.4 2,087,314 - ABZR86_RS09370 0.28 +0.1
Or see this region's nucleotide sequence