Experiment: N-Acetyl-D-glucosamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS08135 and ABZR86_RS08140 are separated by 78 nucleotides ABZR86_RS08140 and ABZR86_RS08145 are separated by 138 nucleotides ABZR86_RS08145 and ABZR86_RS08150 are separated by 96 nucleotides
ABZR86_RS08135: ABZR86_RS08135 - hypothetical protein, at 1,814,497 to 1,815,096
_RS08135
ABZR86_RS08140: ABZR86_RS08140 - iron-sulfur cluster carrier protein ApbC, at 1,815,175 to 1,816,269
_RS08140
ABZR86_RS08145: ABZR86_RS08145 - DUF2147 domain-containing protein, at 1,816,408 to 1,816,848
_RS08145
ABZR86_RS08150: ABZR86_RS08150 - DeoR/GlpR family DNA-binding transcription regulator, at 1,816,945 to 1,817,757
_RS08150
Position (kb)
1815
1816
1817 Strain fitness (log2 ratio)
-2
-1
0
1 at 1814.207 kb on + strand at 1814.207 kb on + strand at 1814.397 kb on + strand at 1814.800 kb on + strand, within ABZR86_RS08135 at 1815.095 kb on - strand at 1815.157 kb on + strand at 1815.157 kb on + strand at 1815.158 kb on - strand at 1816.304 kb on - strand at 1816.304 kb on - strand at 1816.304 kb on - strand at 1816.383 kb on + strand at 1816.383 kb on + strand at 1816.384 kb on - strand at 1816.384 kb on - strand at 1816.384 kb on - strand at 1816.384 kb on - strand at 1816.461 kb on + strand, within ABZR86_RS08145 at 1816.741 kb on + strand, within ABZR86_RS08145 at 1816.742 kb on - strand, within ABZR86_RS08145 at 1816.742 kb on - strand, within ABZR86_RS08145 at 1816.742 kb on - strand, within ABZR86_RS08145 at 1816.795 kb on + strand, within ABZR86_RS08145 at 1816.796 kb on - strand, within ABZR86_RS08145 at 1816.847 kb on - strand at 1816.856 kb on + strand at 1816.856 kb on + strand at 1816.857 kb on - strand at 1816.872 kb on + strand at 1816.872 kb on + strand at 1816.879 kb on + strand at 1816.880 kb on - strand at 1816.893 kb on + strand at 1816.893 kb on + strand at 1816.893 kb on + strand at 1816.894 kb on - strand at 1816.894 kb on - strand at 1816.894 kb on - strand at 1816.894 kb on - strand at 1816.894 kb on - strand at 1816.946 kb on + strand at 1816.947 kb on - strand at 1816.947 kb on - strand at 1816.998 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction N-Acetyl-D-glucosamine (N) remove 1,814,207 + -0.6 1,814,207 + -0.1 1,814,397 + -0.4 1,814,800 + ABZR86_RS08135 0.51 -1.6 1,815,095 - -0.7 1,815,157 + -0.4 1,815,157 + +0.7 1,815,158 - -0.1 1,816,304 - -0.4 1,816,304 - -1.0 1,816,304 - -1.3 1,816,383 + -0.0 1,816,383 + -0.4 1,816,384 - +0.2 1,816,384 - -0.0 1,816,384 - +1.4 1,816,384 - +0.2 1,816,461 + ABZR86_RS08145 0.12 +0.8 1,816,741 + ABZR86_RS08145 0.76 +0.1 1,816,742 - ABZR86_RS08145 0.76 +0.2 1,816,742 - ABZR86_RS08145 0.76 +0.2 1,816,742 - ABZR86_RS08145 0.76 +0.3 1,816,795 + ABZR86_RS08145 0.88 -0.1 1,816,796 - ABZR86_RS08145 0.88 +0.3 1,816,847 - -0.4 1,816,856 + -0.3 1,816,856 + +0.2 1,816,857 - +0.0 1,816,872 + +0.5 1,816,872 + +0.0 1,816,879 + -0.0 1,816,880 - +0.4 1,816,893 + -0.6 1,816,893 + -0.7 1,816,893 + +0.0 1,816,894 - -1.2 1,816,894 - +0.2 1,816,894 - -0.0 1,816,894 - +0.2 1,816,894 - +0.1 1,816,946 + -0.7 1,816,947 - -1.1 1,816,947 - -1.9 1,816,998 - -1.4
Or see this region's nucleotide sequence