Experiment: N-Acetyl-D-glucosamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS00250 and ABZR86_RS00255 are separated by 189 nucleotides ABZR86_RS00255 and ABZR86_RS00260 are separated by 135 nucleotides
ABZR86_RS00250: ABZR86_RS00250 - HDOD domain-containing protein, at 43,885 to 44,934
_RS00250
ABZR86_RS00255: ABZR86_RS00255 - LLM class flavin-dependent oxidoreductase, at 45,124 to 46,122
_RS00255
ABZR86_RS00260: ABZR86_RS00260 - DUF72 domain-containing protein, at 46,258 to 47,088
_RS00260
Position (kb) 45
46
47 Strain fitness (log2 ratio) -2
-1
0
1 at 44.277 kb on + strand, within ABZR86_RS00250 at 44.301 kb on - strand, within ABZR86_RS00250 at 44.301 kb on - strand, within ABZR86_RS00250 at 44.528 kb on + strand, within ABZR86_RS00250 at 44.529 kb on - strand, within ABZR86_RS00250 at 44.529 kb on - strand, within ABZR86_RS00250 at 44.529 kb on - strand, within ABZR86_RS00250 at 44.924 kb on - strand at 44.924 kb on - strand at 44.930 kb on + strand at 44.930 kb on + strand at 44.931 kb on - strand at 44.931 kb on - strand at 45.241 kb on + strand, within ABZR86_RS00255 at 45.241 kb on + strand, within ABZR86_RS00255 at 45.309 kb on + strand, within ABZR86_RS00255 at 45.493 kb on + strand, within ABZR86_RS00255 at 45.494 kb on - strand, within ABZR86_RS00255 at 45.541 kb on + strand, within ABZR86_RS00255 at 45.541 kb on + strand, within ABZR86_RS00255 at 45.668 kb on - strand, within ABZR86_RS00255 at 45.722 kb on - strand, within ABZR86_RS00255 at 45.908 kb on - strand, within ABZR86_RS00255 at 46.075 kb on + strand at 46.075 kb on + strand at 46.076 kb on - strand at 46.219 kb on + strand at 46.220 kb on - strand at 46.220 kb on - strand at 46.220 kb on - strand at 46.220 kb on - strand at 46.332 kb on - strand at 46.499 kb on + strand, within ABZR86_RS00260 at 46.500 kb on - strand, within ABZR86_RS00260 at 46.552 kb on - strand, within ABZR86_RS00260 at 46.553 kb on + strand, within ABZR86_RS00260 at 46.554 kb on - strand, within ABZR86_RS00260 at 46.592 kb on + strand, within ABZR86_RS00260 at 46.592 kb on + strand, within ABZR86_RS00260 at 46.592 kb on + strand, within ABZR86_RS00260 at 46.592 kb on + strand, within ABZR86_RS00260 at 46.592 kb on + strand, within ABZR86_RS00260 at 46.593 kb on - strand, within ABZR86_RS00260 at 46.593 kb on - strand, within ABZR86_RS00260 at 46.593 kb on - strand, within ABZR86_RS00260 at 46.593 kb on - strand, within ABZR86_RS00260 at 46.593 kb on - strand, within ABZR86_RS00260 at 46.830 kb on - strand, within ABZR86_RS00260 at 46.889 kb on + strand, within ABZR86_RS00260 at 46.916 kb on + strand, within ABZR86_RS00260 at 46.916 kb on + strand, within ABZR86_RS00260 at 46.916 kb on + strand, within ABZR86_RS00260 at 46.917 kb on - strand, within ABZR86_RS00260 at 46.917 kb on - strand, within ABZR86_RS00260 at 46.917 kb on - strand, within ABZR86_RS00260 at 46.958 kb on + strand, within ABZR86_RS00260 at 46.959 kb on - strand, within ABZR86_RS00260 at 47.018 kb on + strand at 47.019 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction N-Acetyl-D-glucosamine (N) remove 44,277 + ABZR86_RS00250 0.37 +0.7 44,301 - ABZR86_RS00250 0.40 -2.0 44,301 - ABZR86_RS00250 0.40 +1.1 44,528 + ABZR86_RS00250 0.61 -0.1 44,529 - ABZR86_RS00250 0.61 +0.4 44,529 - ABZR86_RS00250 0.61 +0.4 44,529 - ABZR86_RS00250 0.61 -0.9 44,924 - -0.1 44,924 - -0.4 44,930 + +0.5 44,930 + +0.2 44,931 - +0.7 44,931 - -0.0 45,241 + ABZR86_RS00255 0.12 +0.3 45,241 + ABZR86_RS00255 0.12 +0.5 45,309 + ABZR86_RS00255 0.19 +0.4 45,493 + ABZR86_RS00255 0.37 +0.3 45,494 - ABZR86_RS00255 0.37 +0.7 45,541 + ABZR86_RS00255 0.42 +0.5 45,541 + ABZR86_RS00255 0.42 -0.6 45,668 - ABZR86_RS00255 0.54 -1.3 45,722 - ABZR86_RS00255 0.60 +0.2 45,908 - ABZR86_RS00255 0.78 +0.2 46,075 + -1.4 46,075 + +0.1 46,076 - +1.4 46,219 + +0.3 46,220 - -1.1 46,220 - +0.6 46,220 - +0.7 46,220 - -0.0 46,332 - +1.0 46,499 + ABZR86_RS00260 0.29 -0.4 46,500 - ABZR86_RS00260 0.29 -0.0 46,552 - ABZR86_RS00260 0.35 -0.5 46,553 + ABZR86_RS00260 0.35 +0.5 46,554 - ABZR86_RS00260 0.36 -0.6 46,592 + ABZR86_RS00260 0.40 +0.8 46,592 + ABZR86_RS00260 0.40 +0.0 46,592 + ABZR86_RS00260 0.40 -1.1 46,592 + ABZR86_RS00260 0.40 +0.1 46,592 + ABZR86_RS00260 0.40 -0.0 46,593 - ABZR86_RS00260 0.40 -0.1 46,593 - ABZR86_RS00260 0.40 -1.2 46,593 - ABZR86_RS00260 0.40 -2.5 46,593 - ABZR86_RS00260 0.40 -0.1 46,593 - ABZR86_RS00260 0.40 +0.7 46,830 - ABZR86_RS00260 0.69 -0.5 46,889 + ABZR86_RS00260 0.76 +0.1 46,916 + ABZR86_RS00260 0.79 -1.9 46,916 + ABZR86_RS00260 0.79 -0.2 46,916 + ABZR86_RS00260 0.79 -0.2 46,917 - ABZR86_RS00260 0.79 +0.2 46,917 - ABZR86_RS00260 0.79 -0.2 46,917 - ABZR86_RS00260 0.79 +0.9 46,958 + ABZR86_RS00260 0.84 -0.6 46,959 - ABZR86_RS00260 0.84 +0.6 47,018 + +0.3 47,019 - -0.2
Or see this region's nucleotide sequence