Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4089

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
4,911,197	-		Shewana3_4088	0.33	-0.8
4,911,291	+		Shewana3_4088	0.40	-0.2
4,911,293	+		Shewana3_4088	0.40	-0.1
4,911,321	-		Shewana3_4088	0.43	+0.9
4,911,321	-		Shewana3_4088	0.43	-0.2
4,911,363	-		Shewana3_4088	0.46	-0.1
4,911,514	+		Shewana3_4088	0.58	-0.9
4,911,531	-		Shewana3_4088	0.60	+0.0
4,911,555	+		Shewana3_4088	0.62	+0.2
4,911,563	-		Shewana3_4088	0.62	-0.2
4,911,649	+		Shewana3_4088	0.69	-0.1
4,911,997	+				-0.1
4,911,999	-				-0.6
4,912,309	-		Shewana3_4089	0.26	+0.1
4,912,318	-		Shewana3_4089	0.27	+1.4
4,912,349	-		Shewana3_4089	0.30	+0.7
4,912,396	+		Shewana3_4089	0.34	+1.7
4,912,432	-		Shewana3_4089	0.38	+0.2
4,912,436	+		Shewana3_4089	0.38	-0.2
4,912,534	+		Shewana3_4089	0.48	+0.3
4,912,569	+		Shewana3_4089	0.52	+0.2
4,912,624	-		Shewana3_4089	0.57	+3.3
4,912,735	-		Shewana3_4089	0.68	-0.9
4,912,752	-		Shewana3_4089	0.70	+0.1
4,912,752	-		Shewana3_4089	0.70	+0.0
4,912,778	+		Shewana3_4089	0.72	+0.2
4,912,845	-		Shewana3_4089	0.79	+0.1
4,912,886	-		Shewana3_4089	0.83	+0.0
4,912,922	-		Shewana3_4089	0.87	-0.1
4,913,029	+				+0.4