Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3957

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
4,755,145	-		Shewana3_3956	0.25	-0.2
4,755,160	+		Shewana3_3956	0.27	-0.7
4,755,240	-		Shewana3_3956	0.37	-0.0
4,755,271	-		Shewana3_3956	0.41	-0.1
4,755,278	-		Shewana3_3956	0.41	+0.1
4,755,283	-		Shewana3_3956	0.42	+0.3
4,755,373	-		Shewana3_3956	0.53	+0.0
4,755,380	+		Shewana3_3956	0.54	-0.4
4,755,388	+		Shewana3_3956	0.55	+0.4
4,755,441	+		Shewana3_3956	0.61	-0.3
4,755,441	+		Shewana3_3956	0.61	+0.2
4,755,441	+		Shewana3_3956	0.61	-1.9
4,755,565	+		Shewana3_3956	0.76	-1.2
4,755,573	-		Shewana3_3956	0.77	+1.4
4,755,573	-		Shewana3_3956	0.77	-0.6
4,755,605	+		Shewana3_3956	0.81	+0.1
4,755,620	+		Shewana3_3956	0.83	-0.3
4,755,641	-		Shewana3_3956	0.85	+0.0
4,755,743	-				-0.3
4,756,086	+				-0.0
4,756,094	-				-0.5
4,756,119	+		Shewana3_3957	0.10	+0.2
4,756,264	-		Shewana3_3957	0.34	-0.1
4,756,303	-		Shewana3_3957	0.40	+0.1
4,756,303	-		Shewana3_3957	0.40	+0.6
4,756,395	+		Shewana3_3957	0.55	-0.0
4,756,407	+		Shewana3_3957	0.57	+0.3
4,756,490	+		Shewana3_3957	0.71	+1.2
4,756,508	-		Shewana3_3957	0.74	+0.1
4,756,515	-		Shewana3_3957	0.75	-0.0
4,756,730	-				-0.3
4,756,730	-				-0.2
4,756,785	-				+0.1
4,756,839	-				-0.4
4,756,901	+		Shewana3_3958	0.13	-0.5
4,756,909	-		Shewana3_3958	0.13	+0.1
4,756,945	+		Shewana3_3958	0.16	-1.3
4,757,011	+		Shewana3_3958	0.21	+0.9
4,757,044	-		Shewana3_3958	0.24	-0.2
4,757,046	-		Shewana3_3958	0.24	-0.1
4,757,048	+		Shewana3_3958	0.24	-0.7
4,757,056	-		Shewana3_3958	0.25	+0.0
4,757,069	+		Shewana3_3958	0.26	-0.4
4,757,069	+		Shewana3_3958	0.26	-0.3
4,757,077	-		Shewana3_3958	0.27	+0.1
4,757,077	-		Shewana3_3958	0.27	+0.1
4,757,118	-		Shewana3_3958	0.30	-0.1
4,757,167	+		Shewana3_3958	0.34	-0.1
4,757,329	-		Shewana3_3958	0.46	-0.1
4,757,359	-		Shewana3_3958	0.49	-0.2
4,757,360	-		Shewana3_3958	0.49	+0.1
4,757,508	-		Shewana3_3958	0.61	-0.7
4,757,641	+		Shewana3_3958	0.71	-0.8
4,757,649	-		Shewana3_3958	0.72	+0.1