Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3840

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
4,610,208	-		Shewana3_3839	0.13	-0.0
4,610,234	-		Shewana3_3839	0.16	+0.1
4,610,499	+		Shewana3_3839	0.42	-0.0
4,610,584	+		Shewana3_3839	0.51	-0.3
4,610,584	+		Shewana3_3839	0.51	-0.1
4,610,592	-		Shewana3_3839	0.52	-0.6
4,610,707	+		Shewana3_3839	0.63	+0.4
4,610,707	+		Shewana3_3839	0.63	-0.5
4,610,712	+		Shewana3_3839	0.64	-1.7
4,610,769	-		Shewana3_3839	0.70	-0.3
4,610,860	-		Shewana3_3839	0.79	+0.1
4,610,862	+		Shewana3_3839	0.79	-0.3
4,610,995	+				+0.5
4,611,130	+				+0.2
4,611,280	+		Shewana3_3840	0.48	+0.4
4,611,326	-		Shewana3_3840	0.63	-0.6
4,611,326	-		Shewana3_3840	0.63	-0.9
4,611,386	-		Shewana3_3840	0.82	-0.1
4,611,471	+				-0.6
4,611,510	+				+0.1
4,611,521	+				+0.1
4,611,529	-				-0.4
4,611,563	-				-0.5
4,611,677	+		Shewana3_3841	0.17	+0.2
4,611,709	+		Shewana3_3841	0.19	-1.1
4,611,717	-		Shewana3_3841	0.20	-2.0
4,611,766	+		Shewana3_3841	0.23	-0.1
4,611,838	+		Shewana3_3841	0.28	+1.1
4,611,838	+		Shewana3_3841	0.28	-1.0
4,611,846	-		Shewana3_3841	0.29	-1.6
4,611,846	-		Shewana3_3841	0.29	-0.0
4,611,913	-		Shewana3_3841	0.33	-0.3
4,612,013	-		Shewana3_3841	0.40	-0.8
4,612,021	+		Shewana3_3841	0.41	-0.1
4,612,021	+		Shewana3_3841	0.41	+1.5
4,612,029	-		Shewana3_3841	0.41	-0.4
4,612,057	+		Shewana3_3841	0.43	+0.3
4,612,207	+		Shewana3_3841	0.53	+0.3
4,612,377	-		Shewana3_3841	0.65	+0.4
4,612,410	+		Shewana3_3841	0.67	-0.2
4,612,443	-		Shewana3_3841	0.70	-0.2