Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3777

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
4,536,559	+				+2.1
4,536,591	+				-1.3
4,536,681	+	pyrE	Shewana3_3776	0.17	-0.8
4,536,757	-	pyrE	Shewana3_3776	0.29	-0.7
4,536,873	-	pyrE	Shewana3_3776	0.47	-0.5
4,537,177	-				-0.5
4,537,378	-				-1.5
4,537,497	-		Shewana3_3777	0.25	-1.1
4,537,606	-		Shewana3_3777	0.41	-2.1
4,537,645	-		Shewana3_3777	0.46	-1.7
4,537,745	-		Shewana3_3777	0.60	-1.6
4,537,806	+		Shewana3_3777	0.69	+0.0
4,537,925	-		Shewana3_3777	0.85	-1.3
4,537,952	-		Shewana3_3777	0.89	+0.1
4,537,964	+				-0.7
4,537,964	+				-0.2
4,538,079	-				+0.3
4,538,103	+				-0.0
4,538,145	+				+0.1
4,538,154	-				-0.3
4,538,373	-		Shewana3_3778	0.15	-0.5
4,538,379	+		Shewana3_3778	0.16	+0.0
4,538,491	-		Shewana3_3778	0.29	-0.3
4,538,497	-		Shewana3_3778	0.29	+2.4
4,538,572	+		Shewana3_3778	0.38	-0.1
4,538,577	+		Shewana3_3778	0.39	-0.4
4,538,585	-		Shewana3_3778	0.40	-0.1
4,538,608	-		Shewana3_3778	0.42	+0.2
4,538,718	+		Shewana3_3778	0.55	-1.5
4,538,916	+		Shewana3_3778	0.78	+1.0