Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3582

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
4,296,666	-		Shewana3_3581	0.25	+0.3
4,296,812	+		Shewana3_3581	0.39	+0.1
4,296,956	+		Shewana3_3581	0.54	-0.4
4,297,006	-		Shewana3_3581	0.59	+0.3
4,297,037	-		Shewana3_3581	0.62	-0.4
4,297,159	+		Shewana3_3581	0.74	-1.8
4,297,165	+		Shewana3_3581	0.75	-0.1
4,297,324	+				-0.1
4,297,356	+				-0.5
4,297,450	-				-0.4
4,297,455	-				-0.3
4,297,567	-				-0.4
4,297,615	+				-0.2
4,297,623	-				+0.6
4,297,672	-				-0.3
4,297,672	-				+0.2
4,297,684	-				+2.0
4,297,761	+				-0.2
4,297,821	+		Shewana3_3582	0.13	-0.9
4,297,829	-		Shewana3_3582	0.13	-0.5
4,298,055	-		Shewana3_3582	0.26	-0.1
4,298,059	+		Shewana3_3582	0.26	-1.1
4,298,060	-		Shewana3_3582	0.26	-0.4
4,298,067	-		Shewana3_3582	0.27	-1.8
4,298,067	-		Shewana3_3582	0.27	-0.2
4,298,139	-		Shewana3_3582	0.31	-0.0
4,298,236	-		Shewana3_3582	0.36	+0.1
4,298,371	+		Shewana3_3582	0.44	+0.1
4,298,379	-		Shewana3_3582	0.44	-1.7
4,298,479	+		Shewana3_3582	0.50	-0.7
4,298,740	+		Shewana3_3582	0.65	-1.4
4,298,963	+		Shewana3_3582	0.77	-0.5
4,298,963	+		Shewana3_3582	0.77	-0.4
4,299,103	-		Shewana3_3582	0.85	-0.0
4,299,202	+				-0.5
4,299,210	-				-0.5
4,299,235	+				+0.1
4,299,235	+				-0.2
4,299,323	+				-0.2
4,299,387	-				-0.8
4,299,474	+				+0.1
4,299,482	-				-0.3
4,299,647	-		Shewana3_3583	0.14	-0.5
4,299,678	-		Shewana3_3583	0.16	-0.1
4,299,678	-		Shewana3_3583	0.16	-0.1
4,299,710	-		Shewana3_3583	0.18	+0.2
4,299,720	-		Shewana3_3583	0.19	-0.5
4,299,825	+		Shewana3_3583	0.27	-0.9
4,299,880	-		Shewana3_3583	0.31	+0.5
4,299,880	-		Shewana3_3583	0.31	-0.1
4,299,976	-		Shewana3_3583	0.38	+0.4
4,300,105	-		Shewana3_3583	0.47	+0.2
4,300,296	-		Shewana3_3583	0.61	-1.3
4,300,296	-		Shewana3_3583	0.61	-0.2