Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3491

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
4,185,470	-				+0.1
4,185,518	-				+0.0
4,185,763	+				-0.5
4,185,763	+				-2.9
4,185,771	+				-0.5
4,185,781	+				+0.0
4,185,789	-				+0.0
4,185,849	-		Shewana3_3490	0.34	-1.4
4,185,930	+		Shewana3_3490	0.67	-0.6
4,185,957	+		Shewana3_3490	0.79	-0.6
4,185,957	+		Shewana3_3490	0.79	+0.0
4,185,965	-		Shewana3_3490	0.82	+1.2
4,186,010	+				-1.0
4,186,049	+				+1.5
4,186,238	+				-0.1
4,186,246	-				+1.4
4,186,348	+				-0.1
4,186,363	-				-0.5
4,186,490	-		Shewana3_3491	0.12	-1.0
4,186,490	-		Shewana3_3491	0.12	-0.2
4,186,519	-		Shewana3_3491	0.14	+0.2
4,186,960	-		Shewana3_3491	0.41	-0.9
4,187,074	+		Shewana3_3491	0.47	+0.2
4,187,138	+		Shewana3_3491	0.51	-0.3
4,187,336	-		Shewana3_3491	0.63	-0.4
4,187,537	-		Shewana3_3491	0.75	+1.4
4,187,641	-		Shewana3_3491	0.82	+0.7
4,187,661	-		Shewana3_3491	0.83	+0.4
4,187,723	-		Shewana3_3491	0.86	+0.2
4,187,823	+				-0.0
4,187,908	+				+0.6
4,187,916	-				-0.8
4,187,956	+				-0.8
4,188,035	+				-0.5
4,188,044	-				-1.1
4,188,171	+		Shewana3_3492	0.12	-0.9
4,188,208	-		Shewana3_3492	0.21	-0.6
4,188,221	-		Shewana3_3492	0.24	-0.2
4,188,329	+		Shewana3_3492	0.52	-0.9
4,188,433	+		Shewana3_3492	0.79	+0.0
4,188,433	+		Shewana3_3492	0.79	+0.5
4,188,456	-		Shewana3_3492	0.85	-1.5
4,188,603	-				+0.0
4,188,614	+				+1.4
4,188,623	-				-0.4
4,188,727	-				-0.9
4,188,751	+				-0.9