Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3390

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
4,059,489	-				+1.1
4,059,500	-				-0.4
4,059,526	+				+1.1
4,059,761	-		Shewana3_3388	0.75	-0.8
4,059,781	-		Shewana3_3388	0.80	+0.1
4,059,824	+				+0.9
4,059,832	+				-0.2
4,059,871	-				-0.5
4,060,245	+				+0.3
4,060,258	-				+0.8
4,060,357	+		Shewana3_3390	0.12	-0.4
4,060,367	+		Shewana3_3390	0.14	-0.3
4,060,449	-		Shewana3_3390	0.31	-0.7
4,060,571	+		Shewana3_3390	0.57	-1.3
4,060,723	-		Shewana3_3390	0.89	-1.4
4,060,797	-				-0.1
4,060,912	+		Shewana3_3391	0.31	-0.6
4,060,954	-		Shewana3_3391	0.47	-0.1
4,060,954	-		Shewana3_3391	0.47	+0.1
4,060,960	-		Shewana3_3391	0.49	+2.2
4,060,960	-		Shewana3_3391	0.49	-0.0
4,060,967	-		Shewana3_3391	0.52	-0.4
4,060,967	-		Shewana3_3391	0.52	-0.1
4,061,018	+		Shewana3_3391	0.71	-0.7
4,061,089	+				+0.2
4,061,089	+				-0.0
4,061,097	-				+0.1
4,061,720	-				-0.1
4,061,720	-				+0.2
4,061,720	-				+0.1
4,061,769	+				+0.5