Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3379

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
4,049,342	+		Shewana3_3378	0.63	-0.1
4,049,455	+		Shewana3_3378	0.71	+0.1
4,049,463	-		Shewana3_3378	0.72	-0.7
4,049,611	+		Shewana3_3378	0.82	-0.8
4,050,011	-				-0.1
4,050,163	+				+0.4
4,050,257	-				-0.5
4,050,273	+				+0.1
4,050,420	+				+0.5
4,050,425	+		Shewana3_3379	0.10	+0.5
4,050,428	-		Shewana3_3379	0.11	-0.3
4,050,470	+		Shewana3_3379	0.15	+2.3
4,050,470	+		Shewana3_3379	0.15	-0.9
4,050,478	-		Shewana3_3379	0.15	-0.5
4,050,478	-		Shewana3_3379	0.15	-0.6
4,050,539	+		Shewana3_3379	0.21	-0.1
4,050,698	+		Shewana3_3379	0.37	-1.6
4,050,715	-		Shewana3_3379	0.38	-0.3
4,051,017	+		Shewana3_3379	0.67	+0.5
4,051,146	+		Shewana3_3379	0.80	-0.2
4,051,191	+		Shewana3_3379	0.84	-1.1
4,051,199	-		Shewana3_3379	0.85	-1.6
4,051,248	+		Shewana3_3379	0.89	-0.3
4,051,248	+		Shewana3_3379	0.89	+0.1
4,051,248	+		Shewana3_3379	0.89	-0.3
4,051,279	+				+0.2
4,051,287	-				-0.2
4,051,287	-				-1.2
4,051,359	-				-1.2
4,051,417	-				-0.2
4,051,446	-				-0.1
4,051,682	+		Shewana3_3380	0.34	-0.5
4,051,695	-		Shewana3_3380	0.37	-0.3
4,051,835	-		Shewana3_3380	0.70	+0.1
4,051,873	+		Shewana3_3380	0.79	-1.1
4,051,885	+		Shewana3_3380	0.82	-0.4
4,051,885	+		Shewana3_3380	0.82	-0.4
4,051,900	-		Shewana3_3380	0.85	-0.3