Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3300

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
3,953,195	+		Shewana3_3299	0.49	+2.3
3,953,318	-		Shewana3_3299	0.56	-0.3
3,953,320	+		Shewana3_3299	0.56	-1.1
3,953,604	-		Shewana3_3299	0.73	-0.1
3,953,677	-		Shewana3_3299	0.78	-1.7
3,953,820	+		Shewana3_3299	0.86	-0.5
3,953,930	-				+0.3
3,953,973	+				+1.6
3,953,989	-				-0.0
3,953,994	+				-0.5
3,954,114	+				-0.7
3,954,268	-				-1.1
3,954,277	-				-0.7
3,954,436	-		Shewana3_3300	0.21	-1.0
3,954,543	+		Shewana3_3300	0.30	-0.0
3,954,559	+		Shewana3_3300	0.32	-0.2
3,954,625	+		Shewana3_3300	0.37	-1.5
3,954,625	+		Shewana3_3300	0.37	-0.1
3,954,628	-		Shewana3_3300	0.38	+0.1
3,954,858	-		Shewana3_3300	0.57	+0.3
3,954,858	-		Shewana3_3300	0.57	-0.5
3,954,858	-		Shewana3_3300	0.57	-0.2
3,954,858	-		Shewana3_3300	0.57	-0.7
3,954,998	+		Shewana3_3300	0.69	-0.9
3,955,006	-		Shewana3_3300	0.70	+0.3
3,955,006	-		Shewana3_3300	0.70	-0.5
3,955,012	+		Shewana3_3300	0.70	-0.2
3,955,071	+		Shewana3_3300	0.75	+0.4
3,955,161	-		Shewana3_3300	0.83	-0.2
3,955,354	+				-0.3
3,955,637	-				+0.2
3,955,682	-				-0.0
3,955,682	-				-0.5
3,955,811	-				-0.5
3,955,816	-				+0.0
3,955,821	-				-0.5
3,955,834	+				-0.2
3,955,873	+				+1.0
3,955,880	-				-0.3
3,955,881	-				-1.2
3,955,881	-				+0.2
3,955,982	+				+0.0
3,955,982	+				-0.2
3,956,017	-				+0.4
3,956,028	+		Shewana3_3301	0.10	-0.2
3,956,046	-		Shewana3_3301	0.10	-0.0
3,956,078	+		Shewana3_3301	0.11	+1.3
3,956,081	-		Shewana3_3301	0.11	-0.0
3,956,081	-		Shewana3_3301	0.11	-1.1
3,956,125	-		Shewana3_3301	0.12	-0.2
3,956,141	+		Shewana3_3301	0.12	+0.2
3,956,150	-		Shewana3_3301	0.13	-0.2
3,956,153	+		Shewana3_3301	0.13	-0.4
3,956,313	+		Shewana3_3301	0.16	+0.1