Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3240

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
3,883,827	+				+0.7
3,883,837	+				-1.2
3,883,845	-				+0.3
3,883,874	+				-0.4
3,883,987	+		Shewana3_3239	0.13	-1.4
3,884,249	+		Shewana3_3239	0.41	-0.9
3,884,290	+		Shewana3_3239	0.46	-0.3
3,884,520	+		Shewana3_3239	0.71	-0.2
3,884,556	+		Shewana3_3239	0.75	-0.8
3,884,671	-		Shewana3_3239	0.87	-1.8
3,884,691	-		Shewana3_3239	0.89	+0.5
3,884,703	-				-0.2
3,884,717	-				-0.8
3,884,811	+				-0.3
3,884,824	+				-0.0
3,884,889	+				+0.1
3,884,922	+		Shewana3_3240	0.11	-0.4
3,885,120	+		Shewana3_3240	0.31	-0.4
3,885,128	-		Shewana3_3240	0.31	-1.9
3,885,206	-		Shewana3_3240	0.39	-0.6
3,885,206	-		Shewana3_3240	0.39	-0.6
3,885,211	+		Shewana3_3240	0.40	+1.1
3,885,322	+		Shewana3_3240	0.51	-0.5
3,885,530	+		Shewana3_3240	0.71	+0.6
3,885,543	-		Shewana3_3240	0.72	-1.0
3,885,612	-		Shewana3_3240	0.79	+2.3
3,885,648	+		Shewana3_3240	0.83	-1.2
3,885,731	-				-0.9
3,885,840	-				-1.7
3,886,018	+	hmuV	Shewana3_3241	0.22	-0.2
3,886,026	-	hmuV	Shewana3_3241	0.23	-1.4
3,886,142	+	hmuV	Shewana3_3241	0.37	+1.7
3,886,150	-	hmuV	Shewana3_3241	0.38	-0.8
3,886,329	+	hmuV	Shewana3_3241	0.60	+0.8
3,886,453	+	hmuV	Shewana3_3241	0.75	+1.7
3,886,461	-	hmuV	Shewana3_3241	0.76	-0.2
3,886,494	-	hmuV	Shewana3_3241	0.80	-0.4
3,886,529	-	hmuV	Shewana3_3241	0.85	-0.8
3,886,695	+				-0.4
3,886,698	-				+0.0
3,886,734	-				+0.7
3,886,734	-				+0.4
3,886,792	-		Shewana3_3242	0.16	-0.3