Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3232

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
3,875,067	+		Shewana3_3231	0.48	-0.4
3,875,105	-		Shewana3_3231	0.50	+1.1
3,875,230	+		Shewana3_3231	0.58	+0.1
3,875,238	-		Shewana3_3231	0.59	-0.3
3,875,238	-		Shewana3_3231	0.59	+1.0
3,875,238	-		Shewana3_3231	0.59	+0.3
3,875,261	-		Shewana3_3231	0.60	-0.4
3,875,303	-		Shewana3_3231	0.63	+2.3
3,875,304	-		Shewana3_3231	0.63	-0.2
3,875,718	+		Shewana3_3231	0.88	-0.7
3,876,039	-				-0.2
3,876,049	-				-0.2
3,876,063	+				-0.9
3,876,131	+				+1.4
3,876,283	-		Shewana3_3232	0.15	+0.2
3,876,479	-		Shewana3_3232	0.25	-0.5
3,876,572	+		Shewana3_3232	0.30	+0.4
3,876,674	+		Shewana3_3232	0.36	+0.7
3,876,676	+		Shewana3_3232	0.36	+0.1
3,876,684	-		Shewana3_3232	0.37	-0.3
3,876,686	+		Shewana3_3232	0.37	+0.9
3,876,686	+		Shewana3_3232	0.37	-0.4
3,876,686	+		Shewana3_3232	0.37	-1.8
3,876,754	-		Shewana3_3232	0.40	+0.3
3,877,128	+		Shewana3_3232	0.60	-0.7
3,877,251	-		Shewana3_3232	0.67	+0.1
3,877,375	+		Shewana3_3232	0.74	+0.0
3,877,649	+		Shewana3_3232	0.88	+2.7
3,877,657	-		Shewana3_3232	0.89	-0.2
3,877,815	+				+0.4
3,877,910	+				-0.2
3,878,120	-				+0.6
3,878,285	+		Shewana3_3233	0.25	-0.7
3,878,285	+		Shewana3_3233	0.25	+1.3
3,878,293	-		Shewana3_3233	0.26	+0.5
3,878,293	-		Shewana3_3233	0.26	+1.0
3,878,303	-		Shewana3_3233	0.28	+1.5
3,878,375	-		Shewana3_3233	0.41	+0.8
3,878,401	+		Shewana3_3233	0.46	+1.5
3,878,401	+		Shewana3_3233	0.46	+1.7
3,878,401	+		Shewana3_3233	0.46	+2.1
3,878,467	-		Shewana3_3233	0.58	-0.5
3,878,479	+		Shewana3_3233	0.60	+0.7
3,878,501	-		Shewana3_3233	0.64	+0.6
3,878,501	-		Shewana3_3233	0.64	+0.5
3,878,501	-		Shewana3_3233	0.64	-0.5
3,878,565	-		Shewana3_3233	0.75	+1.0
3,878,589	-		Shewana3_3233	0.79	+0.7
3,878,589	-		Shewana3_3233	0.79	+0.3
3,878,618	+		Shewana3_3233	0.85	+1.6
3,878,734	+				+1.3
3,878,742	-				+0.4