Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3181

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
3,819,953	-		Shewana3_3180	0.56	+0.1
3,820,204	+				-0.7
3,820,304	-				-0.7
3,820,488	+				+0.5
3,820,496	-				+0.1
3,820,496	-				+0.0
3,820,536	+				-0.8
3,820,536	+				-0.7
3,820,540	-				+0.0
3,820,544	-				+0.2
3,820,639	-				+0.7
3,820,685	+				-0.2
3,820,693	-				-0.2
3,820,722	+				+0.8
3,820,740	-				+0.0
3,820,854	-				-1.9
3,820,967	+		Shewana3_3181	0.15	-0.9
3,821,028	+		Shewana3_3181	0.41	-0.3
3,821,102	+		Shewana3_3181	0.72	-0.5
3,821,430	+				-0.5
3,821,503	-				+0.8
3,821,503	-				-0.4
3,821,558	+		Shewana3_3182	0.10	+0.2
3,821,652	-		Shewana3_3182	0.20	-0.3
3,821,782	-		Shewana3_3182	0.35	+1.1
3,821,904	+		Shewana3_3182	0.48	-0.5
3,821,904	+		Shewana3_3182	0.48	-0.6
3,821,904	+		Shewana3_3182	0.48	-0.1
3,821,912	-		Shewana3_3182	0.49	+1.3
3,821,912	-		Shewana3_3182	0.49	-0.7
3,821,938	+		Shewana3_3182	0.52	+0.3
3,821,938	+		Shewana3_3182	0.52	-0.2
3,822,042	+		Shewana3_3182	0.63	-1.2
3,822,139	-		Shewana3_3182	0.74	-0.9
3,822,160	+		Shewana3_3182	0.76	-0.1