Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3177

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
3,816,861	+		Shewana3_3175	0.70	+0.1
3,816,869	-		Shewana3_3175	0.71	-1.4
3,817,011	+				+0.5
3,817,077	+				-1.8
3,817,161	-		Shewana3_3176	0.11	-2.2
3,817,434	-		Shewana3_3176	0.55	-2.1
3,817,523	-		Shewana3_3176	0.70	-2.3
3,817,624	+		Shewana3_3176	0.86	+0.0
3,817,718	+				-0.8
3,817,891	-				-0.5
3,817,978	+		Shewana3_3177	0.20	-1.5
3,818,287	-		Shewana3_3177	0.70	-0.4
3,818,321	+		Shewana3_3177	0.75	-0.3
3,818,350	+		Shewana3_3177	0.80	-0.4
3,818,391	+		Shewana3_3177	0.87	-0.6
3,818,399	-		Shewana3_3177	0.88	+0.2
3,818,399	-		Shewana3_3177	0.88	-0.1
3,818,440	-				-0.4
3,818,529	+				-2.1
3,818,529	+				-0.9
3,818,529	+				+0.1
3,818,537	-				+0.6
3,818,749	-		Shewana3_3178	0.54	+0.0
3,818,779	-		Shewana3_3178	0.62	+0.3
3,818,870	+		Shewana3_3178	0.83	+0.3
3,818,878	-		Shewana3_3178	0.85	+1.9
3,818,947	-				-0.4
3,818,995	+				+0.5
3,818,995	+				-0.1
3,819,003	-				+0.3
3,819,142	+		Shewana3_3179	0.13	-0.2
3,819,152	-		Shewana3_3179	0.15	-1.0
3,819,209	-		Shewana3_3179	0.27	+1.0
3,819,270	+		Shewana3_3179	0.40	-2.4
3,819,289	-		Shewana3_3179	0.44	-0.7
3,819,371	-		Shewana3_3179	0.61	-1.6