Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2991

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
3,596,454	-		Shewana3_2990	0.33	-0.2
3,596,571	+		Shewana3_2990	0.47	+0.7
3,596,837	+		Shewana3_2990	0.77	-0.0
3,596,837	+		Shewana3_2990	0.77	+1.3
3,596,837	+		Shewana3_2990	0.77	+0.3
3,596,845	-		Shewana3_2990	0.77	-0.8
3,596,895	+		Shewana3_2990	0.83	+0.3
3,596,915	+		Shewana3_2990	0.85	+0.7
3,596,915	+		Shewana3_2990	0.85	-0.0
3,597,086	+				+0.1
3,597,179	-				-3.0
3,597,262	-				-0.2
3,597,262	-				-0.3
3,597,337	-				+0.5
3,597,342	-				+0.7
3,597,349	-				-0.6
3,597,353	+				-0.7
3,597,441	+		Shewana3_2991	0.17	+0.5
3,597,449	-		Shewana3_2991	0.18	+0.4
3,597,588	+		Shewana3_2991	0.39	-0.2
3,597,588	+		Shewana3_2991	0.39	-1.8
3,597,588	+		Shewana3_2991	0.39	-1.0
3,597,745	-		Shewana3_2991	0.63	-1.1
3,597,804	-		Shewana3_2991	0.73	-2.2
3,597,929	-				-0.0
3,597,951	-				+0.2
3,598,401	+		Shewana3_2992	0.46	+0.1
3,598,403	+		Shewana3_2992	0.46	+1.3
3,598,590	-		Shewana3_2992	0.75	-3.1
3,598,628	+		Shewana3_2992	0.81	+0.4
3,598,674	+		Shewana3_2992	0.89	-0.5
3,598,682	+				+2.3
3,598,682	+				-1.0
3,598,682	+				-0.7
3,598,682	+				-0.9
3,598,682	+				-0.4
3,598,682	+				+0.7