Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2638

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
3,147,242	+				+1.4
3,147,250	-				+0.8
3,147,250	-				+2.4
3,147,250	-				+0.1
3,147,253	+				+0.8
3,147,270	+				+2.4
3,147,291	-				+0.3
3,147,307	+				-0.6
3,147,307	+				+2.4
3,147,307	+				+0.8
3,147,307	+				-0.2
3,147,309	+				-0.0
3,147,309	+				+1.4
3,147,309	+				+0.2
3,147,309	+				+0.4
3,147,309	+				+1.4
3,147,309	+				+2.4
3,147,309	+				+0.8
3,147,309	+				-1.1
3,147,309	+				+2.4
3,147,315	-				-1.2
3,147,315	-				-0.8
3,147,317	-				+0.5
3,147,317	-				-1.6
3,147,317	-				+1.1
3,147,317	-				-0.3
3,147,317	-				+0.7
3,147,317	-				+1.1
3,147,317	-				-0.4
3,147,317	-				+1.3
3,147,317	-				+0.9
3,147,317	-				+0.4
3,147,317	-				-0.4
3,147,317	-				-1.6
3,147,317	-				+1.2
3,147,317	-				-1.5
3,147,317	-				+0.4
3,147,317	-				-1.6
3,147,317	-				-0.0
3,147,317	-				-0.8
3,147,317	-				+0.6
3,147,317	-				-0.0
3,147,317	-				-0.4
3,147,317	-				+0.9
3,147,327	+				+1.1
3,147,329	-				+0.0
3,147,329	-				+0.4
3,147,330	-				-0.3
3,147,332	+				+2.4
3,147,332	+				+0.7
3,147,332	+				+0.7
3,147,332	+				+1.7
3,147,332	+				-0.2
3,147,333	+				+1.4
3,147,333	+				+0.1
3,147,340	-				+0.3
3,147,340	-				-1.2
3,147,340	-				+2.4
3,147,340	-				+0.8
3,147,340	-				+0.4
3,147,340	-				+0.5
3,147,340	-				+0.6
3,147,340	-				+0.4
3,147,340	-				-0.4
3,147,340	-				+0.1
3,147,340	-				+0.8
3,147,340	-				-0.8
3,147,340	-				-0.8
3,147,340	-				-0.4
3,147,340	-				-1.8
3,147,340	-				+1.4
3,147,340	-				+1.5
3,147,340	-				-1.3
3,147,340	-				+1.0
3,147,340	-				-0.0
3,147,340	-				-1.0
3,147,340	-				+0.8
3,147,340	-				-0.2
3,147,340	-				+0.4
3,147,340	-				+0.8
3,147,340	-				+0.6
3,147,340	-				+0.1
3,147,340	-				-0.5
3,147,340	-				-1.4
3,147,340	-				-0.1
3,147,341	-				-1.8
3,147,341	-				-0.0
3,147,341	-				-1.7
3,147,341	-				-0.4
3,147,341	-				+1.1
3,147,341	-				-0.1
3,147,341	-				-1.5
3,147,341	-				+0.8
3,147,341	-				+1.4
3,147,341	-				-0.4
3,147,341	-				-0.1
3,147,341	-				+0.4
3,147,341	-				+0.1
3,147,365	+				+0.1
3,147,366	+				-0.0
3,147,373	-				-0.5
3,147,374	-				-0.6
3,147,463	-		Shewana3_2637	0.16	-0.4
3,147,465	+		Shewana3_2637	0.16	+1.4
3,147,489	+		Shewana3_2637	0.20	+0.1
3,147,497	-		Shewana3_2637	0.22	+1.8
3,147,497	-		Shewana3_2637	0.22	+0.1
3,147,518	-		Shewana3_2637	0.26	+1.4
3,147,518	-		Shewana3_2637	0.26	+1.7
3,147,518	-		Shewana3_2637	0.26	-0.5
3,147,542	-		Shewana3_2637	0.30	-0.8
3,147,542	-		Shewana3_2637	0.30	+0.2
3,147,542	-		Shewana3_2637	0.30	-0.4
3,147,703	-		Shewana3_2637	0.59	-3.0
3,147,768	-		Shewana3_2637	0.71	+0.1
3,147,874	-				+0.9
3,147,876	+				+2.4
3,147,886	+				+1.4
3,147,894	-				+2.4
3,147,895	-				+1.1
3,147,901	+				+0.8
3,147,909	-				+1.8
3,147,942	-				+0.8
3,148,017	+				+0.8
3,148,017	+				-2.0
3,148,017	+				-1.2
3,148,017	+				+2.4
3,148,024	+				+0.4
3,148,025	-				+0.1
3,148,025	-				+0.6
3,148,025	-				+0.4
3,148,025	-				-0.8
3,148,037	+				+1.8
3,148,049	+				-0.1
3,148,089	+				-0.6
3,148,089	+				+1.2
3,148,089	+				+1.4
3,148,089	+				+1.4
3,148,089	+				+1.4
3,148,089	+				+0.2
3,148,089	+				+0.1
3,148,089	+				+0.4
3,148,089	+				-1.7
3,148,097	-				+0.5
3,148,097	-				-0.5
3,148,097	-				-0.6
3,148,097	-				-1.1
3,148,097	-				-0.2
3,148,097	-				-0.8
3,148,099	+				-1.7
3,148,099	+				-0.2
3,148,099	+				+0.4
3,148,099	+				+1.4
3,148,107	-				+0.8
3,148,107	-				+2.4
3,148,107	-				+0.8
3,148,113	+				+0.4
3,148,128	+				+2.4
3,148,147	+				-0.2
3,148,155	+				+0.1
3,148,155	+				-0.2
3,148,155	-				-0.6
3,148,163	-				-0.6
3,148,197	-				-0.4
3,148,216	-				-0.8
3,148,292	+				+2.5
3,148,300	-				-0.1
3,148,307	+				+1.5
3,148,320	-				+2.1
3,148,379	-		Shewana3_2638	0.13	-2.2
3,148,385	-		Shewana3_2638	0.14	-1.9
3,148,387	-		Shewana3_2638	0.14	+1.1
3,148,391	-		Shewana3_2638	0.14	+2.2
3,148,429	+		Shewana3_2638	0.17	+0.5
3,148,429	+		Shewana3_2638	0.17	+2.5
3,148,429	+		Shewana3_2638	0.17	+1.5
3,148,437	-		Shewana3_2638	0.17	-0.1
3,148,437	-		Shewana3_2638	0.17	+0.1
3,148,437	-		Shewana3_2638	0.17	+1.5
3,148,437	-		Shewana3_2638	0.17	+0.5
3,148,437	-		Shewana3_2638	0.17	-0.2
3,148,463	+		Shewana3_2638	0.19	-0.4
3,148,479	+		Shewana3_2638	0.20	+1.1
3,148,487	-		Shewana3_2638	0.21	+0.1
3,148,520	+		Shewana3_2638	0.23	+1.5
3,148,520	+		Shewana3_2638	0.23	+1.5
3,148,542	+		Shewana3_2638	0.25	+2.5
3,148,550	-		Shewana3_2638	0.26	+0.5
3,148,566	+		Shewana3_2638	0.27	+2.5
3,148,566	+		Shewana3_2638	0.27	+2.5
3,148,566	+		Shewana3_2638	0.27	+2.5
3,148,566	+		Shewana3_2638	0.27	+0.5
3,148,566	+		Shewana3_2638	0.27	+2.5
3,148,566	+		Shewana3_2638	0.27	-1.1
3,148,566	+		Shewana3_2638	0.27	+2.5
3,148,574	-		Shewana3_2638	0.27	+1.5
3,148,574	-		Shewana3_2638	0.27	-0.6
3,148,574	-		Shewana3_2638	0.27	-0.1
3,148,574	-		Shewana3_2638	0.27	-0.9
3,148,574	-		Shewana3_2638	0.27	+0.5
3,148,574	-		Shewana3_2638	0.27	-0.1
3,148,574	-		Shewana3_2638	0.27	-0.1
3,148,574	-		Shewana3_2638	0.27	+1.0
3,148,574	-		Shewana3_2638	0.27	+1.1
3,148,574	-		Shewana3_2638	0.27	+1.5
3,148,587	-		Shewana3_2638	0.28	-1.7
3,148,589	+		Shewana3_2638	0.28	+0.1
3,148,617	+		Shewana3_2638	0.30	+2.5
3,148,625	-		Shewana3_2638	0.31	+0.5
3,148,676	+		Shewana3_2638	0.35	+2.5
3,148,677	-		Shewana3_2638	0.35	-0.1
3,148,683	+		Shewana3_2638	0.35	+1.5
3,148,684	-		Shewana3_2638	0.35	+0.9
3,148,684	-		Shewana3_2638	0.35	+0.3
3,148,684	-		Shewana3_2638	0.35	+0.5
3,148,686	-		Shewana3_2638	0.35	-0.3
3,148,686	-		Shewana3_2638	0.35	+0.1
3,148,705	-		Shewana3_2638	0.37	+0.2
3,148,813	+		Shewana3_2638	0.45	-1.3
3,148,828	-		Shewana3_2638	0.46	+0.9
3,148,833	-		Shewana3_2638	0.46	+0.5
3,148,884	+		Shewana3_2638	0.50	+2.5
3,148,891	+		Shewana3_2638	0.50	+1.5
3,148,894	+		Shewana3_2638	0.50	+0.6
3,148,894	+		Shewana3_2638	0.50	+0.5
3,148,902	-		Shewana3_2638	0.51	+0.5
3,148,915	+		Shewana3_2638	0.52	+2.5
3,148,923	+		Shewana3_2638	0.53	+1.5
3,148,938	-		Shewana3_2638	0.54	+1.5
3,148,941	+		Shewana3_2638	0.54	+2.5
3,148,957	-		Shewana3_2638	0.55	+1.7
3,149,009	+		Shewana3_2638	0.59	-0.9
3,149,009	+		Shewana3_2638	0.59	+2.5
3,149,009	+		Shewana3_2638	0.59	-0.4
3,149,010	+		Shewana3_2638	0.59	-0.4
3,149,010	+		Shewana3_2638	0.59	-0.4
3,149,010	+		Shewana3_2638	0.59	+0.9
3,149,010	+		Shewana3_2638	0.59	+1.5
3,149,010	+		Shewana3_2638	0.59	+1.5
3,149,010	+		Shewana3_2638	0.59	-1.0
3,149,010	+		Shewana3_2638	0.59	+2.5
3,149,010	+		Shewana3_2638	0.59	+0.1
3,149,010	+		Shewana3_2638	0.59	+1.2
3,149,010	+		Shewana3_2638	0.59	-0.4
3,149,010	+		Shewana3_2638	0.59	+2.5
3,149,010	+		Shewana3_2638	0.59	-0.7
3,149,010	+		Shewana3_2638	0.59	+2.5
3,149,010	+		Shewana3_2638	0.59	+0.9
3,149,017	-		Shewana3_2638	0.59	+0.5
3,149,017	-		Shewana3_2638	0.59	-1.0
3,149,017	-		Shewana3_2638	0.59	+0.5
3,149,017	-		Shewana3_2638	0.59	+1.0
3,149,017	-		Shewana3_2638	0.59	+0.3
3,149,018	-		Shewana3_2638	0.59	+1.1
3,149,018	-		Shewana3_2638	0.59	+0.5
3,149,018	-		Shewana3_2638	0.59	-1.2
3,149,018	-		Shewana3_2638	0.59	+0.1
3,149,023	-		Shewana3_2638	0.60	-1.0
3,149,023	-		Shewana3_2638	0.60	-0.3
3,149,025	-		Shewana3_2638	0.60	-1.1
3,149,120	-		Shewana3_2638	0.67	+1.5
3,149,122	-		Shewana3_2638	0.67	+0.3
3,149,127	-		Shewana3_2638	0.67	+0.9
3,149,129	+		Shewana3_2638	0.67	-0.4
3,149,129	+		Shewana3_2638	0.67	+2.5
3,149,137	-		Shewana3_2638	0.68	+1.5
3,149,173	-		Shewana3_2638	0.71	+1.0
3,149,188	+		Shewana3_2638	0.72	+0.5
3,149,190	+		Shewana3_2638	0.72	+0.4
3,149,198	-		Shewana3_2638	0.72	+2.5
3,149,198	-		Shewana3_2638	0.72	+2.5
3,149,213	-		Shewana3_2638	0.74	-0.4
3,149,229	+		Shewana3_2638	0.75	+0.5
3,149,232	-		Shewana3_2638	0.75	-0.5
3,149,252	+		Shewana3_2638	0.76	-0.9
3,149,260	-		Shewana3_2638	0.77	+0.5
3,149,260	-		Shewana3_2638	0.77	-0.7
3,149,330	+		Shewana3_2638	0.82	-0.6
3,149,330	+		Shewana3_2638	0.82	+1.9
3,149,330	+		Shewana3_2638	0.82	-0.5
3,149,330	+		Shewana3_2638	0.82	-0.2
3,149,338	-		Shewana3_2638	0.83	+2.5
3,149,338	-		Shewana3_2638	0.83	-0.7
3,149,338	-		Shewana3_2638	0.83	-0.4
3,149,338	-		Shewana3_2638	0.83	-0.5
3,149,437	-		Shewana3_2638	0.90	+2.0
3,149,441	+				+0.9
3,149,451	+				+0.6
3,149,487	+				-0.4
3,149,487	+				-0.1
3,149,500	-				+0.1