Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2594
Experiment: Vanillin 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Vanillin 1 mM |
|---|---|---|---|---|---|
| remove | |||||
| 3,097,724 | - | Shewana3_2593 | 0.74 | +0.1 | |
| 3,098,072 | + | +1.3 | |||
| 3,098,403 | - | Shewana3_2594 | 0.35 | -0.5 | |
| 3,099,074 | - | +0.9 | |||
| 3,099,376 | - | Shewana3_2595 | 0.22 | +2.5 | |
| 3,099,388 | + | Shewana3_2595 | 0.23 | +0.9 | |
| 3,099,487 | - | Shewana3_2595 | 0.30 | +0.5 | |
| 3,099,520 | + | Shewana3_2595 | 0.32 | +1.9 | |
| 3,099,648 | + | Shewana3_2595 | 0.41 | +2.5 | |
| 3,099,687 | - | Shewana3_2595 | 0.43 | +1.5 | |
| 3,099,746 | + | Shewana3_2595 | 0.47 | -0.3 | |
| 3,099,759 | - | Shewana3_2595 | 0.48 | +1.5 |
Or see this region's nucleotide sequence