Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2502

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
2,992,738	-				+0.4
2,992,879	+				+0.0
2,992,904	-				+0.6
2,992,980	+		Shewana3_2501	0.19	-0.4
2,993,014	-		Shewana3_2501	0.24	-1.1
2,993,160	+		Shewana3_2501	0.45	+0.3
2,993,380	+		Shewana3_2501	0.78	-0.3
2,993,380	+		Shewana3_2501	0.78	-0.5
2,993,445	-		Shewana3_2501	0.87	+1.4
2,993,452	+		Shewana3_2501	0.88	+0.5
2,993,524	+				-0.4
2,993,974	+		Shewana3_2502	0.33	-0.6
2,994,030	-		Shewana3_2502	0.37	+0.8
2,994,101	+		Shewana3_2502	0.43	+2.4
2,994,112	-		Shewana3_2502	0.44	+0.9
2,994,168	-		Shewana3_2502	0.49	+1.5
2,994,427	-		Shewana3_2502	0.71	-0.2
2,994,811	+				+2.4
2,995,103	-		Shewana3_2503	0.41	-0.4
2,995,109	-		Shewana3_2503	0.42	-1.2
2,995,109	-		Shewana3_2503	0.42	+0.6
2,995,109	-		Shewana3_2503	0.42	-0.0
2,995,109	-		Shewana3_2503	0.42	-0.2
2,995,164	-		Shewana3_2503	0.50	+1.4
2,995,164	-		Shewana3_2503	0.50	-1.5
2,995,318	-		Shewana3_2503	0.72	-0.2
2,995,318	-		Shewana3_2503	0.72	+0.8
2,995,504	-				+0.8
2,995,513	+				-1.1
2,995,521	-				+2.4
2,995,527	-				-1.8
2,995,632	-				-0.5
2,995,655	-				-0.6
2,995,683	-				+0.6
2,995,732	-				+1.4