Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2487

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
2,973,101	-		Shewana3_2486	0.36	+0.2
2,973,143	+		Shewana3_2486	0.40	+0.1
2,973,182	+		Shewana3_2486	0.43	+1.0
2,973,182	+		Shewana3_2486	0.43	-0.3
2,973,190	-		Shewana3_2486	0.43	-0.2
2,973,196	-		Shewana3_2486	0.44	+1.5
2,973,215	-		Shewana3_2486	0.45	+0.3
2,973,235	+		Shewana3_2486	0.47	-0.2
2,973,236	-		Shewana3_2486	0.47	+0.2
2,973,305	+		Shewana3_2486	0.52	-0.2
2,973,589	+		Shewana3_2486	0.75	+0.5
2,973,786	+				-0.1
2,973,794	-				-0.5
2,973,794	-				+0.2
2,973,794	-				-0.9
2,973,794	-				-0.1
2,973,798	+				+0.1
2,973,798	+				+1.5
2,973,821	+				-0.5
2,973,828	-				+1.0
2,973,858	+				+1.0
2,974,032	+				-0.1
2,974,040	-				+0.3
2,974,139	-				-0.7
2,974,309	-		Shewana3_2487	0.17	+0.9
2,974,456	+		Shewana3_2487	0.25	-1.3
2,974,456	+		Shewana3_2487	0.25	+0.2
2,974,466	+		Shewana3_2487	0.26	-2.0
2,974,469	-		Shewana3_2487	0.26	-0.3
2,974,478	+		Shewana3_2487	0.27	+0.5
2,974,768	+		Shewana3_2487	0.43	-1.5
2,974,768	+		Shewana3_2487	0.43	+0.1
2,974,776	-		Shewana3_2487	0.44	-0.4
2,974,776	-		Shewana3_2487	0.44	+0.5
2,974,776	-		Shewana3_2487	0.44	+1.9
2,974,822	+		Shewana3_2487	0.46	-0.1
2,975,194	+		Shewana3_2487	0.68	-0.9
2,975,227	+		Shewana3_2487	0.70	+3.0
2,975,227	+		Shewana3_2487	0.70	+1.1
2,975,227	+		Shewana3_2487	0.70	-0.1
2,975,235	-		Shewana3_2487	0.70	+0.5
2,975,235	-		Shewana3_2487	0.70	+1.5
2,975,235	-		Shewana3_2487	0.70	+0.5
2,975,380	+		Shewana3_2487	0.78	+0.1
2,975,552	-		Shewana3_2487	0.88	+1.1
2,975,562	+		Shewana3_2487	0.89	+0.3
2,975,630	+				-0.0
2,975,665	+				+0.1
2,975,665	+				-0.8
2,975,717	+				+0.1
2,976,180	-				+0.9
2,976,180	-				+2.5
2,976,324	+				+0.9
2,976,330	+				+0.9
2,976,331	-				-0.3
2,976,416	+				+0.9
2,976,553	-				+0.9
2,976,565	-				+2.5