Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2485

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
2,971,061	-				+0.1
2,971,272	-		Shewana3_2484	0.44	+0.2
2,971,323	+		Shewana3_2484	0.54	+0.1
2,971,407	-		Shewana3_2484	0.69	+1.1
2,971,409	+		Shewana3_2484	0.69	+2.5
2,971,758	-				-0.1
2,971,768	+				+2.5
2,971,787	-				-0.4
2,971,904	-				+2.5
2,971,904	-				+1.2
2,971,937	-				-0.7
2,971,973	+		Shewana3_2485	0.11	+1.3
2,972,025	-		Shewana3_2485	0.19	-0.7
2,972,103	-		Shewana3_2485	0.32	-1.0
2,972,113	-		Shewana3_2485	0.33	-0.5
2,972,113	-		Shewana3_2485	0.33	-0.9
2,972,282	+		Shewana3_2485	0.60	+1.2
2,972,282	+		Shewana3_2485	0.60	+0.1
2,972,290	-		Shewana3_2485	0.62	+2.5
2,972,781	+		Shewana3_2486	0.11	+0.9
2,973,101	-		Shewana3_2486	0.36	+0.2
2,973,143	+		Shewana3_2486	0.40	+0.1
2,973,182	+		Shewana3_2486	0.43	+1.0
2,973,182	+		Shewana3_2486	0.43	-0.3
2,973,190	-		Shewana3_2486	0.43	-0.2
2,973,196	-		Shewana3_2486	0.44	+1.5
2,973,215	-		Shewana3_2486	0.45	+0.3
2,973,235	+		Shewana3_2486	0.47	-0.2
2,973,236	-		Shewana3_2486	0.47	+0.2
2,973,305	+		Shewana3_2486	0.52	-0.2