Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2088

Experiment: Vanillin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1 mM
2,504,356	-				+0.8
2,504,394	-				-1.3
2,504,514	+		Shewana3_2087	0.13	+1.5
2,504,519	+		Shewana3_2087	0.13	-0.7
2,504,522	-		Shewana3_2087	0.14	+0.9
2,504,522	-		Shewana3_2087	0.14	+1.5
2,504,522	-		Shewana3_2087	0.14	-0.3
2,504,532	-		Shewana3_2087	0.15	-0.1
2,504,623	+		Shewana3_2087	0.26	+0.2
2,504,697	-		Shewana3_2087	0.34	-0.3
2,504,699	+		Shewana3_2087	0.35	+0.9
2,504,726	-		Shewana3_2087	0.38	+0.2
2,504,726	-		Shewana3_2087	0.38	+1.5
2,504,805	+		Shewana3_2087	0.47	-2.0
2,504,825	+		Shewana3_2087	0.49	+0.5
2,504,932	+		Shewana3_2087	0.62	+3.9
2,505,041	+		Shewana3_2087	0.75	+0.9
2,505,109	+		Shewana3_2087	0.83	+0.5
2,505,117	-				+2.5
2,505,543	+		Shewana3_2088	0.21	+0.3
2,505,720	+		Shewana3_2088	0.40	+0.5
2,505,755	+		Shewana3_2088	0.44	+1.9
2,505,826	+		Shewana3_2088	0.52	+0.8
2,506,046	+		Shewana3_2088	0.76	-0.3
2,506,304	+				+0.9
2,507,058	+				+2.8
2,507,169	-		Shewana3_2089	0.13	+2.5
2,507,180	-		Shewana3_2089	0.13	+2.5
2,507,253	+		Shewana3_2089	0.16	+0.9
2,507,253	+		Shewana3_2089	0.16	-0.8